HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=47)
MYTVKPGDTMWKIAVKYQIGISEIIAANPQIKNPNLIYPGQKINIPN

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	7r1l-a1-m1-cC	47	47	1.0000	1.0000	1.0000	3.32e-28	7r1l-a1-m1-cA_7r1l-a1-m1-cC, 7r1l-a1-m1-cB_7r1l-a1-m1-cC
2	7r1l-a1-m1-cB	46	46	0.9787	1.0000	1.0000	1.62e-27	7r1l-a1-m1-cB_7r1l-a1-m1-cC
3	7r1l-a1-m1-cA	46	46	0.9787	1.0000	1.0000	1.62e-27	7r1l-a1-m1-cA_7r1l-a1-m1-cC
4	4b8v-a1-m2-cA	189	45	0.4255	0.1058	0.4444	3.75e-07	4b8v-a1-m1-cA_4b8v-a1-m2-cA
5	4b8v-a1-m2-cA	189	45	0.4468	0.1111	0.4667	1.19e-05	4b8v-a1-m1-cA_4b8v-a1-m2-cA
6	4b8v-a1-m1-cA	189	45	0.4255	0.1058	0.4444	3.75e-07	4b8v-a1-m1-cA_4b8v-a1-m2-cA
7	4b8v-a1-m1-cA	189	45	0.4468	0.1111	0.4667	1.19e-05	4b8v-a1-m1-cA_4b8v-a1-m2-cA
8	3jc9-a1-m1-cTl	163	47	0.3404	0.0982	0.3404	1.96e-04	3jc9-a1-m1-cTk_3jc9-a1-m1-cTl
9	3jc9-a1-m1-cTk	163	47	0.3404	0.0982	0.3404	1.96e-04	3jc9-a1-m1-cTk_3jc9-a1-m1-cTl
10	3jc8-a1-m1-cTl	163	47	0.3404	0.0982	0.3404	1.96e-04	3jc8-a1-m1-cTa_3jc8-a1-m1-cTl
11	3jc8-a1-m1-cTa	163	47	0.3404	0.0982	0.3404	1.96e-04	3jc8-a1-m1-cTa_3jc8-a1-m1-cTl
12	5bum-a1-m1-cB	49	46	0.3404	0.3265	0.3478	0.002	5bum-a1-m1-cA_5bum-a1-m1-cB
13	5bum-a1-m1-cA	49	46	0.3404	0.3265	0.3478	0.002	5bum-a1-m1-cA_5bum-a1-m1-cB
14	4a1i-a5-m1-cE	164	45	0.3617	0.1037	0.3778	0.003	4a1i-a5-m1-cE_4a1i-a5-m1-cD
15	4a1i-a5-m1-cD	165	45	0.3617	0.1030	0.3778	0.004	4a1i-a5-m1-cE_4a1i-a5-m1-cD
16	4a1k-a1-m2-cA	164	45	0.3617	0.1037	0.3778	0.004	4a1k-a1-m1-cA_4a1k-a1-m2-cA
17	4a1k-a1-m1-cA	164	45	0.3617	0.1037	0.3778	0.004	4a1k-a1-m1-cA_4a1k-a1-m2-cA
18	1y7m-a1-m1-cB	161	45	0.3617	0.1056	0.3778	0.004	1y7m-a1-m1-cA_1y7m-a1-m1-cB
19	1y7m-a1-m1-cA	161	45	0.3617	0.1056	0.3778	0.004	1y7m-a1-m1-cA_1y7m-a1-m1-cB
20	2qez-a4-m1-cC	422	24	0.2553	0.0284	0.5000	0.85	2qez-a4-m1-cB_2qez-a4-m1-cC
21	2qez-a4-m1-cB	422	24	0.2553	0.0284	0.5000	0.85	2qez-a4-m1-cB_2qez-a4-m1-cC
22	2qez-a1-m1-cC	422	24	0.2553	0.0284	0.5000	0.85	2qez-a1-m1-cC_2qez-a1-m1-cF
23	2qez-a1-m1-cF	428	24	0.2553	0.0280	0.5000	0.85	2qez-a1-m1-cC_2qez-a1-m1-cF
24	1y9q-a1-m2-cA	173	31	0.2128	0.0578	0.3226	2.2	1y9q-a1-m1-cA_1y9q-a1-m2-cA
25	1y9q-a1-m1-cA	173	31	0.2128	0.0578	0.3226	2.2	1y9q-a1-m1-cA_1y9q-a1-m2-cA
26	7ufs-a1-m1-cD	1040	24	0.1702	0.0077	0.3333	8.0	7ufs-a1-m1-cA_7ufs-a1-m1-cD, 7ufs-a1-m1-cB_7ufs-a1-m1-cD, 7ufs-a1-m1-cC_7ufs-a1-m1-cD
27	7ufs-a1-m1-cC	1040	24	0.1702	0.0077	0.3333	8.0	7ufs-a1-m1-cC_7ufs-a1-m1-cD
28	7ufs-a1-m1-cB	1040	24	0.1702	0.0077	0.3333	8.0	7ufs-a1-m1-cB_7ufs-a1-m1-cD
29	7ufs-a1-m1-cA	1040	24	0.1702	0.0077	0.3333	8.0	7ufs-a1-m1-cA_7ufs-a1-m1-cD

[Back]

Reference:
Jacob Schwartz et al.