HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=85)
MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP
CKKDDSCSFVGKTWTLYLKHVAECH

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	1un6-a2-m1-cB	86	85	1.0000	0.9884	1.0000	1.84e-60	1un6-a2-m1-cD_1un6-a2-m1-cB
2	2j7j-a1-m2-cA	85	85	1.0000	1.0000	1.0000	2.21e-60	2j7j-a1-m1-cA_2j7j-a1-m2-cA
3	2j7j-a1-m1-cA	85	85	1.0000	1.0000	1.0000	2.21e-60	2j7j-a1-m1-cA_2j7j-a1-m2-cA
4	1un6-a2-m1-cD	58	56	0.6588	0.9655	1.0000	1.69e-37	1un6-a2-m1-cD_1un6-a2-m1-cB
5	6a57-a1-m2-cA	131	66	0.2706	0.1756	0.3485	2.86e-06	6a57-a1-m1-cA_6a57-a1-m2-cA
6	6a57-a1-m2-cA	131	51	0.1765	0.1145	0.2941	0.94	6a57-a1-m1-cA_6a57-a1-m2-cA
7	6a57-a1-m1-cA	131	66	0.2706	0.1756	0.3485	2.86e-06	6a57-a1-m1-cA_6a57-a1-m2-cA
8	6a57-a1-m1-cA	131	51	0.1765	0.1145	0.2941	0.94	6a57-a1-m1-cA_6a57-a1-m2-cA
9	1f2i-a2-m1-cJ	66	28	0.1765	0.2273	0.5357	2.03e-05	1f2i-a2-m1-cI_1f2i-a2-m1-cJ
10	1f2i-a2-m1-cJ	66	56	0.2118	0.2727	0.3214	8.01e-04	1f2i-a2-m1-cI_1f2i-a2-m1-cJ
11	1f2i-a2-m1-cI	66	28	0.1765	0.2273	0.5357	2.03e-05	1f2i-a2-m1-cI_1f2i-a2-m1-cJ
12	1f2i-a2-m1-cI	66	56	0.2118	0.2727	0.3214	8.01e-04	1f2i-a2-m1-cI_1f2i-a2-m1-cJ
13	5v3g-a1-m1-cD	170	56	0.2471	0.1235	0.3750	4.51e-04	5v3g-a1-m1-cG_5v3g-a1-m1-cD
14	5v3g-a1-m1-cD	170	57	0.2471	0.1235	0.3684	5.87e-04	5v3g-a1-m1-cG_5v3g-a1-m1-cD
15	5v3g-a1-m1-cD	170	57	0.2471	0.1235	0.3684	0.002	5v3g-a1-m1-cG_5v3g-a1-m1-cD
16	5v3g-a1-m1-cD	170	57	0.2471	0.1235	0.3684	0.004	5v3g-a1-m1-cG_5v3g-a1-m1-cD
17	4m9v-a3-m1-cF	60	59	0.2471	0.3500	0.3559	0.003	4m9v-a3-m1-cC_4m9v-a3-m1-cF
18	4m9v-a3-m1-cC	60	59	0.2471	0.3500	0.3559	0.003	4m9v-a3-m1-cC_4m9v-a3-m1-cF
19	1llm-a1-m1-cD	85	68	0.2000	0.2000	0.2500	0.005	1llm-a1-m1-cD_1llm-a1-m1-cC
20	1llm-a1-m1-cC	87	68	0.2000	0.1954	0.2500	0.005	1llm-a1-m1-cD_1llm-a1-m1-cC
21	8h9h-a1-m1-cG	81	50	0.2118	0.2222	0.3600	0.030	8h9h-a1-m1-cF_8h9h-a1-m1-cG
22	8h9h-a1-m1-cG	81	48	0.2118	0.2222	0.3750	0.043	8h9h-a1-m1-cF_8h9h-a1-m1-cG
23	4rqf-a1-m1-cA	451	19	0.0941	0.0177	0.4211	5.7	4rqf-a1-m1-cA_4rqf-a1-m1-cB
24	4rqf-a1-m1-cB	474	19	0.0941	0.0169	0.4211	6.1	4rqf-a1-m1-cA_4rqf-a1-m1-cB
25	7trw-a1-m2-cA	208	37	0.1882	0.0769	0.4324	9.1	7trw-a1-m1-cA_7trw-a1-m2-cA
26	7trw-a1-m1-cA	208	37	0.1882	0.0769	0.4324	9.1	7trw-a1-m1-cA_7trw-a1-m2-cA

[Back]

Reference:
Jacob Schwartz et al.