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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
NAAAERVSAKNALESYAFNKSAVEDKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHK
RKELEQVCNPIISGLYQGAGG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3lof-a3-m1-cE 81 81 1.0000 1.0000 1.0000 7.03e-55 3lof-a3-m1-cF_3lof-a3-m1-cE
2 3lof-a3-m1-cF 79 79 0.9753 1.0000 1.0000 5.42e-53 3lof-a3-m1-cF_3lof-a3-m1-cE
3 4po2-a3-m2-cB 215 80 0.9136 0.3442 0.9250 4.29e-45 4po2-a3-m1-cB_4po2-a3-m2-cB, 4po2-a3-m2-cB_4po2-a3-m1-cA, 4po2-a3-m2-cB_4po2-a3-m2-cA
4 4po2-a3-m1-cB 215 80 0.9136 0.3442 0.9250 4.29e-45 4po2-a3-m1-cB_4po2-a3-m2-cB
5 4po2-a3-m2-cA 228 80 0.9136 0.3246 0.9250 6.73e-45 4po2-a3-m1-cA_4po2-a3-m2-cA, 4po2-a3-m2-cB_4po2-a3-m2-cA
6 4po2-a3-m1-cA 228 80 0.9136 0.3246 0.9250 6.73e-45 4po2-a3-m1-cA_4po2-a3-m2-cA, 4po2-a3-m2-cB_4po2-a3-m1-cA
7 1ud0-a4-m3-cB 79 74 0.6173 0.6329 0.6757 1.25e-31 1ud0-a4-m1-cD_1ud0-a4-m3-cB, 1ud0-a4-m3-cB_1ud0-a4-m3-cA
8 1ud0-a4-m1-cC 84 80 0.6296 0.6071 0.6375 1.44e-31 1ud0-a4-m3-cA_1ud0-a4-m1-cC
9 1ud0-a4-m3-cA 81 74 0.6173 0.6173 0.6757 1.81e-31 1ud0-a4-m1-cD_1ud0-a4-m3-cA, 1ud0-a4-m3-cA_1ud0-a4-m1-cC, 1ud0-a4-m3-cB_1ud0-a4-m3-cA
10 1ud0-a4-m1-cD 76 72 0.5926 0.6316 0.6667 8.19e-30 1ud0-a4-m1-cD_1ud0-a4-m3-cA, 1ud0-a4-m1-cD_1ud0-a4-m3-cB
11 2p32-a7-m1-cF 82 72 0.5309 0.5244 0.5972 3.87e-23 2p32-a7-m1-cA_2p32-a7-m1-cF, 2p32-a7-m1-cE_2p32-a7-m1-cF
12 2p32-a7-m1-cE 82 72 0.5309 0.5244 0.5972 3.87e-23 2p32-a7-m1-cE_2p32-a7-m1-cF
13 2p32-a7-m1-cA 82 72 0.5309 0.5244 0.5972 3.87e-23 2p32-a7-m1-cA_2p32-a7-m1-cF
14 6asy-a1-m1-cB 606 76 0.3457 0.0462 0.3684 1.80e-09 6asy-a1-m1-cA_6asy-a1-m1-cB
15 6asy-a1-m1-cA 606 76 0.3457 0.0462 0.3684 1.80e-09 6asy-a1-m1-cA_6asy-a1-m1-cB
16 1qv9-a1-m2-cC 266 38 0.1975 0.0602 0.4211 4.2 1qv9-a1-m1-cB_1qv9-a1-m2-cC, 1qv9-a1-m1-cC_1qv9-a1-m2-cC, 1qv9-a1-m2-cB_1qv9-a1-m2-cC
17 1qv9-a1-m2-cB 266 38 0.1975 0.0602 0.4211 4.2 1qv9-a1-m2-cB_1qv9-a1-m2-cC
18 1qv9-a1-m1-cC 266 38 0.1975 0.0602 0.4211 4.2 1qv9-a1-m1-cC_1qv9-a1-m2-cC
19 1qv9-a1-m1-cB 266 38 0.1975 0.0602 0.4211 4.2 1qv9-a1-m1-cB_1qv9-a1-m2-cC
20 6i35-a2-m1-cC 953 61 0.1975 0.0168 0.2623 7.0 6i35-a2-m1-cC_6i35-a2-m1-cD
21 6i35-a2-m1-cD 954 61 0.1975 0.0168 0.2623 7.4 6i35-a2-m1-cC_6i35-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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