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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=65)
NADALELDTRREIYKHIVKSPGLHERQLAKELDVPLSTLVYHLHYLERRELIKSDERYAR
YYATK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5duk-a1-m1-cB 65 65 1.0000 1.0000 1.0000 9.86e-42 5duk-a1-m1-cA_5duk-a1-m1-cB
2 5duk-a1-m1-cA 58 58 0.8923 1.0000 1.0000 1.67e-36 5duk-a1-m1-cA_5duk-a1-m1-cB
3 3f6o-a2-m2-cA 97 52 0.2462 0.1649 0.3077 0.013 3f6o-a2-m1-cA_3f6o-a2-m2-cA
4 3f6o-a2-m1-cA 97 52 0.2462 0.1649 0.3077 0.013 3f6o-a2-m1-cA_3f6o-a2-m2-cA
5 3f6o-a1-m1-cA 97 52 0.2462 0.1649 0.3077 0.013 3f6o-a1-m1-cB_3f6o-a1-m1-cA
6 3f6o-a1-m1-cB 91 51 0.2462 0.1758 0.3137 0.014 3f6o-a1-m1-cB_3f6o-a1-m1-cA
7 3hta-a1-m1-cB 179 45 0.2615 0.0950 0.3778 0.027 3hta-a1-m1-cB_3hta-a1-m1-cA
8 3hta-a1-m1-cA 190 46 0.2615 0.0895 0.3696 0.034 3hta-a1-m1-cB_3hta-a1-m1-cA
9 6jbx-a1-m1-cB 143 54 0.2923 0.1329 0.3519 0.22 6jbx-a1-m1-cB_6jbx-a1-m1-cA
10 6jbx-a1-m1-cA 146 54 0.2923 0.1301 0.3519 0.24 6jbx-a1-m1-cB_6jbx-a1-m1-cA
11 2yx7-a1-m8-cA 150 28 0.1692 0.0733 0.3929 2.4 2yx7-a1-m2-cA_2yx7-a1-m8-cA, 2yx7-a1-m4-cA_2yx7-a1-m8-cA, 2yx7-a1-m6-cA_2yx7-a1-m8-cA
12 2yx7-a1-m6-cA 150 28 0.1692 0.0733 0.3929 2.4 2yx7-a1-m6-cA_2yx7-a1-m8-cA
13 2yx7-a1-m4-cA 150 28 0.1692 0.0733 0.3929 2.4 2yx7-a1-m4-cA_2yx7-a1-m8-cA
14 2yx7-a1-m2-cA 150 28 0.1692 0.0733 0.3929 2.4 2yx7-a1-m2-cA_2yx7-a1-m8-cA
15 2p4w-a1-m1-cA 197 52 0.2923 0.0964 0.3654 3.7 2p4w-a1-m1-cA_2p4w-a1-m1-cB
16 2p4w-a1-m1-cB 198 52 0.2923 0.0960 0.3654 4.0 2p4w-a1-m1-cA_2p4w-a1-m1-cB
17 3ozb-a1-m1-cF 239 23 0.1692 0.0460 0.4783 6.0 3ozb-a1-m1-cC_3ozb-a1-m1-cF
18 3ozb-a1-m1-cD 239 23 0.1692 0.0460 0.4783 6.0 3ozb-a1-m1-cE_3ozb-a1-m1-cD
19 3ozb-a1-m1-cE 236 23 0.1692 0.0466 0.4783 6.2 3ozb-a1-m1-cE_3ozb-a1-m1-cD
20 3ozb-a1-m1-cC 239 23 0.1692 0.0460 0.4783 6.2 3ozb-a1-m1-cC_3ozb-a1-m1-cF
21 1jmu-a1-m1-cF 608 25 0.1538 0.0164 0.4000 8.7 1jmu-a1-m1-cD_1jmu-a1-m1-cF
22 1jmu-a1-m1-cD 608 25 0.1538 0.0164 0.4000 8.7 1jmu-a1-m1-cD_1jmu-a1-m1-cF
23 2cse-a1-m9-cT 641 25 0.1538 0.0156 0.4000 8.7 2cse-a1-m51-cQ_2cse-a1-m9-cT, 2cse-a1-m57-cR_2cse-a1-m9-cT
24 2cse-a1-m9-cR 641 25 0.1538 0.0156 0.4000 8.7 2cse-a1-m9-cQ_2cse-a1-m9-cR
25 2cse-a1-m9-cQ 641 25 0.1538 0.0156 0.4000 8.7 2cse-a1-m9-cQ_2cse-a1-m9-cR
26 2cse-a1-m57-cR 641 25 0.1538 0.0156 0.4000 8.7 2cse-a1-m57-cR_2cse-a1-m9-cT
27 2cse-a1-m51-cQ 641 25 0.1538 0.0156 0.4000 8.7 2cse-a1-m51-cQ_2cse-a1-m9-cT
28 4fht-a1-m1-cA 141 40 0.1692 0.0780 0.2750 8.7 4fht-a1-m1-cA_4fht-a1-m1-cB
29 4g9y-a1-m2-cA 136 40 0.1692 0.0809 0.2750 9.7 4g9y-a1-m1-cA_4g9y-a1-m2-cA
30 4g9y-a1-m1-cA 136 40 0.1692 0.0809 0.2750 9.7 4g9y-a1-m1-cA_4g9y-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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