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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=25)
NADELYKELEDLQERLRKLRKKLRS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3twe-a2-m1-cA 26 25 1.0000 0.9615 1.0000 4.15e-10 3twe-a2-m1-cB_3twe-a2-m1-cA
2 3twe-a1-m1-cA 26 25 1.0000 0.9615 1.0000 4.15e-10 3twe-a1-m2-cB_3twe-a1-m1-cA
3 3twe-a2-m1-cB 25 25 1.0000 1.0000 1.0000 4.21e-10 3twe-a2-m1-cB_3twe-a2-m1-cA
4 3twe-a1-m2-cB 25 25 1.0000 1.0000 1.0000 4.21e-10 3twe-a1-m2-cB_3twe-a1-m1-cA
5 3twf-a2-m1-cB 23 22 0.8000 0.8696 0.9091 0.002 3twf-a2-m1-cA_3twf-a2-m1-cB
6 3twf-a2-m1-cA 22 22 0.8000 0.9091 0.9091 0.003 3twf-a2-m1-cA_3twf-a2-m1-cB
7 5ks8-a1-m1-cD 580 14 0.4000 0.0172 0.7143 7.5 5ks8-a1-m1-cD_5ks8-a1-m1-cC
8 3pmo-a1-m3-cA 357 17 0.2800 0.0196 0.4118 8.2 3pmo-a1-m2-cA_3pmo-a1-m3-cA
9 3pmo-a1-m2-cA 357 17 0.2800 0.0196 0.4118 8.2 3pmo-a1-m2-cA_3pmo-a1-m3-cA
10 5ks8-a1-m1-cC 603 14 0.4000 0.0166 0.7143 8.4 5ks8-a1-m1-cD_5ks8-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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