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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=96)
NAEVTDVRLRRVNTDGRRAIASITLDHEFVVHDIRVIDGNNGLFVAPSKRTPDGEFRDIT
HPINSSTRGKIQDAVLNEYHRLGDTEALEFEEAGAS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2ia9-a2-m1-cD 96 96 1.0000 1.0000 1.0000 2.68e-66 2ia9-a2-m1-cC_2ia9-a2-m1-cD
2 2ia9-a2-m1-cC 83 85 0.8646 1.0000 0.9765 3.78e-54 2ia9-a2-m1-cC_2ia9-a2-m1-cD
3 2i9x-a1-m1-cA 81 75 0.5938 0.7037 0.7600 4.90e-37 2i9x-a1-m1-cB_2i9x-a1-m1-cA
4 2i9x-a1-m1-cB 80 74 0.5833 0.7000 0.7568 3.24e-36 2i9x-a1-m1-cB_2i9x-a1-m1-cA
5 2dgb-a1-m1-cD 81 49 0.1667 0.1975 0.3265 4.0 2dgb-a1-m1-cA_2dgb-a1-m1-cD
6 2dgb-a1-m1-cA 81 49 0.1667 0.1975 0.3265 4.0 2dgb-a1-m1-cA_2dgb-a1-m1-cD
7 6e8l-a3-m1-cD 180 62 0.2396 0.1278 0.3710 7.3 6e8l-a3-m1-cD_6e8l-a3-m1-cF
8 6e8l-a3-m1-cF 182 62 0.2396 0.1264 0.3710 8.3 6e8l-a3-m1-cD_6e8l-a3-m1-cF

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Reference:
Jacob Schwartz et al.

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