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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=82)
NAFVRARIDEDLKNQAADVLAGGLTISDLVRITLTKVAREKALPFDLREPNQLTIQSIKN
SEAGIDVHKAKDADDLFDKLGI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4q2u-a4-m1-cM 82 82 1.0000 1.0000 1.0000 3.92e-54 4q2u-a4-m1-cM_4q2u-a4-m1-cG
2 4q2u-a4-m1-cG 83 82 1.0000 0.9880 1.0000 4.13e-54 4q2u-a4-m1-cM_4q2u-a4-m1-cG
3 4fxe-a1-m2-cA 68 43 0.1829 0.2206 0.3488 1.2 4fxe-a1-m2-cA_4fxe-a1-m2-cB
4 4fxe-a1-m2-cB 78 40 0.1829 0.1923 0.3750 1.7 4fxe-a1-m2-cA_4fxe-a1-m2-cB
5 3lot-a1-m1-cA 300 48 0.1707 0.0467 0.2917 2.6 3lot-a1-m1-cA_3lot-a1-m1-cD
6 3lot-a1-m1-cD 302 48 0.1707 0.0464 0.2917 2.7 3lot-a1-m1-cA_3lot-a1-m1-cD, 3lot-a1-m1-cB_3lot-a1-m1-cD
7 3lot-a1-m1-cB 301 48 0.1707 0.0465 0.2917 2.7 3lot-a1-m1-cB_3lot-a1-m1-cD
8 3ami-a1-m1-cB 422 33 0.1463 0.0284 0.3636 4.7 3ami-a1-m1-cA_3ami-a1-m1-cB
9 3ami-a1-m1-cA 422 33 0.1463 0.0284 0.3636 4.7 3ami-a1-m1-cA_3ami-a1-m1-cB
10 4w4t-a1-m1-cA 381 53 0.1951 0.0420 0.3019 5.2 4w4t-a1-m1-cB_4w4t-a1-m1-cA
11 4w4t-a1-m1-cB 380 53 0.1951 0.0421 0.3019 5.2 4w4t-a1-m1-cB_4w4t-a1-m1-cA
12 7q00-a1-m1-cA 470 44 0.1585 0.0277 0.2955 6.0 7q00-a1-m1-cA_7q00-a1-m1-cB, 7q00-a1-m1-cA_7q00-a1-m1-cD
13 7q00-a1-m1-cD 471 44 0.1585 0.0276 0.2955 6.3 7q00-a1-m1-cA_7q00-a1-m1-cD
14 7q00-a1-m1-cB 471 44 0.1585 0.0276 0.2955 6.3 7q00-a1-m1-cA_7q00-a1-m1-cB
15 3vcz-a2-m2-cC 127 31 0.1463 0.0945 0.3871 7.7 3vcz-a2-m2-cB_3vcz-a2-m2-cC
16 3vcz-a2-m2-cB 127 31 0.1463 0.0945 0.3871 7.7 3vcz-a2-m1-cB_3vcz-a2-m2-cB, 3vcz-a2-m2-cB_3vcz-a2-m2-cC
17 3vcz-a2-m1-cB 127 31 0.1463 0.0945 0.3871 7.7 3vcz-a2-m1-cB_3vcz-a2-m2-cB
18 4foi-a1-m1-cB 899 72 0.2317 0.0211 0.2639 8.1 4foi-a1-m1-cA_4foi-a1-m1-cB
19 4foi-a1-m1-cA 899 72 0.2317 0.0211 0.2639 8.1 4foi-a1-m1-cA_4foi-a1-m1-cB
20 3wgi-a2-m1-cD 217 38 0.1341 0.0507 0.2895 8.6 3wgi-a2-m1-cC_3wgi-a2-m1-cD
21 3wgi-a2-m1-cC 217 38 0.1341 0.0507 0.2895 8.6 3wgi-a2-m1-cC_3wgi-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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