Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=91)
NAIAEKGEKLYHMMMNKKVNLIKDRRRKLSTVPKCFLGNEFVAWLLEIGEISKTEEGVNL
GQALLENGIIHHVSDKHQFKNEQVMYRFRYD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6vsk-a1-m6-cA 91 91 1.0000 1.0000 1.0000 1.33e-64 6vsk-a1-m1-cA_6vsk-a1-m6-cA, 6vsk-a1-m2-cA_6vsk-a1-m6-cA
2 6vsk-a1-m2-cA 91 91 1.0000 1.0000 1.0000 1.33e-64 6vsk-a1-m2-cA_6vsk-a1-m6-cA
3 6vsk-a1-m1-cA 91 91 1.0000 1.0000 1.0000 1.33e-64 6vsk-a1-m1-cA_6vsk-a1-m6-cA
4 7ped-a1-m1-cB 211 86 0.4396 0.1896 0.4651 1.68e-18 7ped-a1-m1-cA_7ped-a1-m1-cB
5 7ped-a1-m1-cB 211 84 0.3187 0.1374 0.3452 1.40e-14 7ped-a1-m1-cA_7ped-a1-m1-cB
6 7ped-a1-m1-cA 211 86 0.4396 0.1896 0.4651 1.68e-18 7ped-a1-m1-cA_7ped-a1-m1-cB
7 7ped-a1-m1-cA 211 84 0.3187 0.1374 0.3452 1.40e-14 7ped-a1-m1-cA_7ped-a1-m1-cB
8 5suz-a1-m2-cB 92 68 0.2527 0.2500 0.3382 1.03e-04 5suz-a1-m1-cA_5suz-a1-m2-cB
9 5suz-a1-m1-cA 92 68 0.2527 0.2500 0.3382 1.03e-04 5suz-a1-m1-cA_5suz-a1-m2-cB
10 5suy-a1-m1-cB 94 68 0.2418 0.2340 0.3235 1.83e-04 5suy-a1-m1-cB_5suy-a1-m1-cA
11 5suy-a1-m1-cA 95 68 0.2418 0.2316 0.3235 2.00e-04 5suy-a1-m1-cB_5suy-a1-m1-cA
12 1cnz-a1-m1-cB 363 76 0.1868 0.0468 0.2237 0.012 1cnz-a1-m1-cA_1cnz-a1-m1-cB
13 1cnz-a1-m1-cA 363 76 0.1868 0.0468 0.2237 0.012 1cnz-a1-m1-cA_1cnz-a1-m1-cB
14 4a3r-a2-m7-cD 428 74 0.2198 0.0467 0.2703 0.76 4a3r-a2-m1-cC_4a3r-a2-m7-cD, 4a3r-a2-m7-cC_4a3r-a2-m7-cD
15 4a3r-a2-m7-cC 428 74 0.2198 0.0467 0.2703 0.76 4a3r-a2-m7-cC_4a3r-a2-m7-cD
16 4a3r-a2-m1-cC 428 74 0.2198 0.0467 0.2703 0.76 4a3r-a2-m1-cC_4a3r-a2-m7-cD
17 5yz0-a1-m1-cB 2362 46 0.1758 0.0068 0.3478 1.4 5yz0-a1-m1-cA_5yz0-a1-m1-cB
18 5yz0-a1-m1-cA 2362 46 0.1758 0.0068 0.3478 1.4 5yz0-a1-m1-cA_5yz0-a1-m1-cB
19 7drj-a1-m1-cA 190 32 0.1429 0.0684 0.4062 3.5 7drj-a1-m1-cB_7drj-a1-m1-cA
20 7drj-a1-m1-cB 186 32 0.1429 0.0699 0.4062 3.8 7drj-a1-m1-cB_7drj-a1-m1-cA
21 1vlc-a1-m2-cA 362 59 0.1429 0.0359 0.2203 5.6 1vlc-a1-m1-cA_1vlc-a1-m2-cA
22 1vlc-a1-m1-cA 362 59 0.1429 0.0359 0.2203 5.6 1vlc-a1-m1-cA_1vlc-a1-m2-cA
23 3ilv-a2-m2-cA 570 27 0.1319 0.0211 0.4444 7.4 3ilv-a2-m1-cA_3ilv-a2-m2-cA
24 3ilv-a2-m1-cA 570 27 0.1319 0.0211 0.4444 7.4 3ilv-a2-m1-cA_3ilv-a2-m2-cA
25 2vd2-a1-m2-cA 212 47 0.1758 0.0755 0.3404 9.3 2vd2-a1-m1-cA_2vd2-a1-m2-cA
26 2vd2-a1-m1-cA 212 47 0.1758 0.0755 0.3404 9.3 2vd2-a1-m1-cA_2vd2-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600