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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=51)
NAKWDQWSSDWQTWNAKWDQWSNDWNAWRSDWQAWKDDWARWNQRWDNWAT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1t8z-a1-m1-cC 51 51 1.0000 1.0000 1.0000 3.49e-25 1t8z-a1-m1-cB_1t8z-a1-m1-cC
2 1t8z-a1-m1-cB 50 50 0.9804 1.0000 1.0000 1.59e-24 1t8z-a1-m1-cB_1t8z-a1-m1-cC
3 2gus-a1-m3-cA 42 41 0.5686 0.6905 0.7073 1.74e-19 2gus-a1-m1-cA_2gus-a1-m3-cA
4 2gus-a1-m1-cA 42 41 0.5686 0.6905 0.7073 1.74e-19 2gus-a1-m1-cA_2gus-a1-m3-cA
5 5c1f-a1-m1-cB 298 44 0.2745 0.0470 0.3182 0.89 5c1f-a1-m1-cA_5c1f-a1-m1-cB
6 5c1f-a1-m1-cA 298 44 0.2745 0.0470 0.3182 0.89 5c1f-a1-m1-cA_5c1f-a1-m1-cB
7 7lbw-a1-m1-cA 193 20 0.1176 0.0311 0.3000 2.0 7lbw-a1-m1-cB_7lbw-a1-m1-cA
8 7lbw-a1-m1-cB 190 20 0.1176 0.0316 0.3000 2.2 7lbw-a1-m1-cB_7lbw-a1-m1-cA
9 2jax-a1-m2-cA 257 28 0.1961 0.0389 0.3571 6.2 2jax-a1-m1-cA_2jax-a1-m2-cA
10 2jax-a1-m1-cA 257 28 0.1961 0.0389 0.3571 6.2 2jax-a1-m1-cA_2jax-a1-m2-cA
11 6npc-a1-m1-cB 372 37 0.2157 0.0296 0.2973 6.9 6npc-a1-m1-cB_6npc-a1-m1-cA
12 6npc-a1-m1-cA 378 37 0.2157 0.0291 0.2973 7.0 6npc-a1-m1-cB_6npc-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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