Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
NALGMIETKGLVGAIEAADAMVKAANVQLVGKEQVGGGLVTVMVRGDVGAVKAATDAGAA
AAERVGELISVHVIPRPHFEVDAILP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4axj-a1-m1-cA 87 86 1.0000 0.9885 1.0000 6.25e-55 4axj-a1-m2-cC_4axj-a1-m1-cA
2 4axj-a1-m2-cC 86 86 1.0000 1.0000 1.0000 6.34e-55 4axj-a1-m2-cC_4axj-a1-m1-cA
3 7mmx-a2-m1-cD 86 85 0.8488 0.8488 0.8588 1.44e-38 7mmx-a2-m3-cF_7mmx-a2-m1-cD
4 7mmx-a2-m3-cF 85 85 0.8488 0.8588 0.8588 2.07e-38 7mmx-a2-m3-cF_7mmx-a2-m1-cD
5 5d6v-a1-m6-cA 90 86 0.7907 0.7556 0.7907 3.27e-36 5d6v-a1-m2-cA_5d6v-a1-m6-cA
6 5d6v-a1-m2-cA 90 86 0.7907 0.7556 0.7907 3.27e-36 5d6v-a1-m2-cA_5d6v-a1-m6-cA
7 3mpy-a1-m6-cA 96 86 0.7209 0.6458 0.7209 4.43e-32 3mpy-a1-m2-cA_3mpy-a1-m6-cA
8 3mpy-a1-m2-cA 96 86 0.7209 0.6458 0.7209 4.43e-32 3mpy-a1-m2-cA_3mpy-a1-m6-cA
9 7ckc-a1-m1-cCz 89 86 0.6744 0.6517 0.6744 3.58e-31 7ckc-a1-m1-cBi_7ckc-a1-m1-cCz
10 7ckc-a1-m1-cBi 89 86 0.6744 0.6517 0.6744 3.58e-31 7ckc-a1-m1-cBi_7ckc-a1-m1-cCz
11 2ewh-a1-m6-cA 92 86 0.6744 0.6304 0.6744 4.50e-31 2ewh-a1-m2-cA_2ewh-a1-m6-cA
12 2ewh-a1-m2-cA 92 86 0.6744 0.6304 0.6744 4.50e-31 2ewh-a1-m2-cA_2ewh-a1-m6-cA
13 3dnc-a1-m6-cA 90 87 0.5698 0.5444 0.5632 2.19e-27 3dnc-a1-m2-cA_3dnc-a1-m6-cA
14 3dnc-a1-m2-cA 90 87 0.5698 0.5444 0.5632 2.19e-27 3dnc-a1-m2-cA_3dnc-a1-m6-cA
15 3ssq-a1-m2-cC 100 87 0.5698 0.4900 0.5632 5.22e-27 3ssq-a1-m1-cC_3ssq-a1-m2-cC
16 3ssq-a1-m1-cC 100 87 0.5698 0.4900 0.5632 5.22e-27 3ssq-a1-m1-cC_3ssq-a1-m2-cC
17 6owg-a1-m1-cDA 100 87 0.5465 0.4700 0.5402 9.28e-26 6owg-a1-m1-cC8_6owg-a1-m1-cDA
18 6owg-a1-m1-cC8 100 87 0.5465 0.4700 0.5402 9.28e-26 6owg-a1-m1-cC8_6owg-a1-m1-cDA
19 6owf-a1-m1-cW 100 87 0.5465 0.4700 0.5402 9.28e-26 6owf-a1-m1-cA6_6owf-a1-m1-cW
20 6owf-a1-m1-cA6 100 87 0.5465 0.4700 0.5402 9.28e-26 6owf-a1-m1-cA6_6owf-a1-m1-cW
21 7mgp-a1-m6-cA 93 85 0.5698 0.5269 0.5765 3.58e-25 7mgp-a1-m2-cA_7mgp-a1-m6-cA
22 7mgp-a1-m2-cA 93 85 0.5698 0.5269 0.5765 3.58e-25 7mgp-a1-m2-cA_7mgp-a1-m6-cA
23 4ox6-a1-m3-cA 103 88 0.4535 0.3786 0.4432 7.34e-17 4ox6-a1-m3-cB_4ox6-a1-m3-cA
24 4ox6-a1-m3-cB 93 88 0.4535 0.4194 0.4432 8.34e-17 4ox6-a1-m3-cB_4ox6-a1-m3-cA
25 2a10-a1-m1-cE 102 88 0.4535 0.3824 0.4432 7.38e-15 2a10-a1-m1-cD_2a10-a1-m1-cE
26 2a10-a1-m1-cD 102 88 0.4535 0.3824 0.4432 7.38e-15 2a10-a1-m1-cD_2a10-a1-m1-cE
27 3pac-a1-m3-cA 183 80 0.3721 0.1749 0.4000 1.22e-07 3pac-a1-m2-cA_3pac-a1-m3-cA
28 3pac-a1-m3-cA 183 81 0.3372 0.1585 0.3580 2.14e-07 3pac-a1-m2-cA_3pac-a1-m3-cA
29 3pac-a1-m2-cA 183 80 0.3721 0.1749 0.4000 1.22e-07 3pac-a1-m2-cA_3pac-a1-m3-cA
30 3pac-a1-m2-cA 183 81 0.3372 0.1585 0.3580 2.14e-07 3pac-a1-m2-cA_3pac-a1-m3-cA
31 3nwg-a2-m3-cA 174 81 0.3372 0.1667 0.3580 1.56e-06 3nwg-a2-m2-cA_3nwg-a2-m3-cA
32 3nwg-a2-m3-cA 174 80 0.3837 0.1897 0.4125 2.89e-06 3nwg-a2-m2-cA_3nwg-a2-m3-cA
33 3nwg-a2-m2-cA 174 81 0.3372 0.1667 0.3580 1.56e-06 3nwg-a2-m2-cA_3nwg-a2-m3-cA
34 3nwg-a2-m2-cA 174 80 0.3837 0.1897 0.4125 2.89e-06 3nwg-a2-m2-cA_3nwg-a2-m3-cA
35 3nwg-a1-m6-cA 174 81 0.3372 0.1667 0.3580 1.56e-06 3nwg-a1-m1-cA_3nwg-a1-m6-cA, 3nwg-a1-m3-cA_3nwg-a1-m6-cA
36 3nwg-a1-m6-cA 174 80 0.3837 0.1897 0.4125 2.89e-06 3nwg-a1-m1-cA_3nwg-a1-m6-cA, 3nwg-a1-m3-cA_3nwg-a1-m6-cA
37 3nwg-a1-m3-cA 174 81 0.3372 0.1667 0.3580 1.56e-06 3nwg-a1-m3-cA_3nwg-a1-m6-cA
38 3nwg-a1-m3-cA 174 80 0.3837 0.1897 0.4125 2.89e-06 3nwg-a1-m3-cA_3nwg-a1-m6-cA
39 3nwg-a1-m1-cA 174 81 0.3372 0.1667 0.3580 1.56e-06 3nwg-a1-m1-cA_3nwg-a1-m6-cA
40 3nwg-a1-m1-cA 174 80 0.3837 0.1897 0.4125 2.89e-06 3nwg-a1-m1-cA_3nwg-a1-m6-cA
41 7du3-a1-m2-cB 327 66 0.2791 0.0734 0.3636 0.47 7du3-a1-m1-cA_7du3-a1-m2-cB
42 7du3-a1-m1-cA 311 66 0.2791 0.0772 0.3636 0.50 7du3-a1-m1-cA_7du3-a1-m2-cB
43 4axi-a1-m3-cB 115 54 0.2093 0.1565 0.3333 1.0 4axi-a1-m3-cB_4axi-a1-m2-cA, 4axi-a1-m3-cB_4axi-a1-m3-cA
44 4axi-a1-m3-cA 116 54 0.2093 0.1552 0.3333 1.1 4axi-a1-m3-cB_4axi-a1-m3-cA
45 4axi-a1-m2-cA 116 54 0.2093 0.1552 0.3333 1.1 4axi-a1-m3-cB_4axi-a1-m2-cA
46 1wpw-a2-m3-cB 336 49 0.1977 0.0506 0.3469 5.4 1wpw-a2-m1-cA_1wpw-a2-m3-cB, 1wpw-a2-m1-cB_1wpw-a2-m3-cB, 1wpw-a2-m3-cA_1wpw-a2-m3-cB
47 1wpw-a2-m3-cA 336 49 0.1977 0.0506 0.3469 5.4 1wpw-a2-m3-cA_1wpw-a2-m3-cB
48 1wpw-a2-m1-cB 336 49 0.1977 0.0506 0.3469 5.4 1wpw-a2-m1-cB_1wpw-a2-m3-cB
49 1wpw-a2-m1-cA 336 49 0.1977 0.0506 0.3469 5.4 1wpw-a2-m1-cA_1wpw-a2-m3-cB
50 1wpw-a1-m2-cB 336 49 0.1977 0.0506 0.3469 5.4 1wpw-a1-m1-cA_1wpw-a1-m2-cB, 1wpw-a1-m1-cB_1wpw-a1-m2-cB
51 1wpw-a1-m1-cB 336 49 0.1977 0.0506 0.3469 5.4 1wpw-a1-m1-cB_1wpw-a1-m2-cB
52 1wpw-a1-m1-cA 336 49 0.1977 0.0506 0.3469 5.4 1wpw-a1-m1-cA_1wpw-a1-m2-cB
53 5f9k-a1-m1-cB 130 54 0.1977 0.1308 0.3148 5.5 5f9k-a1-m1-cC_5f9k-a1-m1-cB
54 5f9k-a1-m1-cC 128 54 0.1977 0.1328 0.3148 5.5 5f9k-a1-m1-cC_5f9k-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600