Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
NAMAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQFDVSRPSLREAIQRL
EAKGLLLRRQGGGTFVQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5kvr-a1-m2-cA 77 77 1.0000 1.0000 1.0000 3.62e-50 5kvr-a1-m1-cA_5kvr-a1-m2-cA
2 5kvr-a1-m1-cA 77 77 1.0000 1.0000 1.0000 3.62e-50 5kvr-a1-m1-cA_5kvr-a1-m2-cA
3 4wwc-a1-m1-cA 213 60 0.3766 0.1362 0.4833 2.01e-10 4wwc-a1-m1-cA_4wwc-a1-m1-cB
4 4u0w-a1-m1-cB 243 60 0.3766 0.1193 0.4833 2.22e-10 4u0w-a1-m1-cA_4u0w-a1-m1-cB
5 4u0w-a1-m1-cA 243 60 0.3766 0.1193 0.4833 2.22e-10 4u0w-a1-m1-cA_4u0w-a1-m1-cB
6 2wv0-a1-m1-cA 243 60 0.3766 0.1193 0.4833 2.27e-10 2wv0-a1-m1-cB_2wv0-a1-m1-cA
7 2wv0-a1-m1-cB 242 60 0.3766 0.1198 0.4833 2.37e-10 2wv0-a1-m1-cB_2wv0-a1-m1-cA
8 4wwc-a1-m1-cB 231 60 0.3766 0.1255 0.4833 2.41e-10 4wwc-a1-m1-cA_4wwc-a1-m1-cB
9 6on4-a1-m1-cA 217 60 0.3636 0.1290 0.4667 2.66e-09 6on4-a1-m1-cB_6on4-a1-m1-cA
10 6wg7-a1-m1-cH 219 60 0.3636 0.1279 0.4667 2.70e-09 6wg7-a1-m1-cH_6wg7-a1-m1-cF
11 6wg7-a1-m1-cD 219 60 0.3636 0.1279 0.4667 2.70e-09 6wg7-a1-m1-cD_6wg7-a1-m1-cF
12 6on4-a1-m1-cB 214 60 0.3636 0.1308 0.4667 2.71e-09 6on4-a1-m1-cB_6on4-a1-m1-cA
13 6az6-a1-m1-cA 203 59 0.3377 0.1281 0.4407 2.94e-09 6az6-a1-m1-cB_6az6-a1-m1-cA
14 6wg7-a1-m1-cF 228 60 0.3636 0.1228 0.4667 3.24e-09 6wg7-a1-m1-cC_6wg7-a1-m1-cF, 6wg7-a1-m1-cD_6wg7-a1-m1-cF, 6wg7-a1-m1-cE_6wg7-a1-m1-cF, 6wg7-a1-m1-cH_6wg7-a1-m1-cF
15 6wg7-a1-m1-cE 228 60 0.3636 0.1228 0.4667 3.24e-09 6wg7-a1-m1-cE_6wg7-a1-m1-cF
16 6wg7-a1-m1-cC 228 60 0.3636 0.1228 0.4667 3.24e-09 6wg7-a1-m1-cC_6wg7-a1-m1-cF
17 6az6-a1-m1-cB 200 59 0.3377 0.1300 0.4407 3.41e-09 6az6-a1-m1-cB_6az6-a1-m1-cA
18 2di3-a1-m1-cA 231 46 0.2857 0.0952 0.4783 3.49e-06 2di3-a1-m1-cB_2di3-a1-m1-cA
19 2di3-a1-m1-cB 230 46 0.2857 0.0957 0.4783 3.52e-06 2di3-a1-m1-cB_2di3-a1-m1-cA
20 5dv5-a1-m1-cB 267 53 0.2987 0.0861 0.4340 4.58e-06 5dv5-a1-m1-cA_5dv5-a1-m1-cB
21 5dv5-a1-m1-cA 267 53 0.2987 0.0861 0.4340 4.58e-06 5dv5-a1-m1-cA_5dv5-a1-m1-cB
22 4pdk-a1-m1-cB 265 53 0.2987 0.0868 0.4340 5.00e-06 4pdk-a1-m1-cA_4pdk-a1-m1-cB
23 5xgf-a1-m2-cA 271 53 0.2987 0.0849 0.4340 5.13e-06 5xgf-a1-m1-cA_5xgf-a1-m2-cA
24 5xgf-a1-m1-cA 271 53 0.2987 0.0849 0.4340 5.13e-06 5xgf-a1-m1-cA_5xgf-a1-m2-cA
25 4p9u-a2-m1-cB 272 53 0.2987 0.0846 0.4340 5.29e-06 4p9u-a2-m1-cA_4p9u-a2-m1-cB
26 4p9u-a2-m1-cA 272 53 0.2987 0.0846 0.4340 5.29e-06 4p9u-a2-m1-cA_4p9u-a2-m1-cB
27 4pdk-a1-m1-cA 259 53 0.2987 0.0888 0.4340 5.32e-06 4pdk-a1-m1-cA_4pdk-a1-m1-cB
28 3bwg-a2-m2-cC 222 60 0.2987 0.1036 0.3833 6.84e-06 3bwg-a2-m1-cC_3bwg-a2-m2-cC
29 3bwg-a2-m1-cC 222 60 0.2987 0.1036 0.3833 6.84e-06 3bwg-a2-m1-cC_3bwg-a2-m2-cC
30 7xp1-a1-m2-cA 198 56 0.3117 0.1212 0.4286 1.23e-05 7xp1-a1-m1-cA_7xp1-a1-m2-cA
31 7xp1-a1-m1-cA 198 56 0.3117 0.1212 0.4286 1.23e-05 7xp1-a1-m1-cA_7xp1-a1-m2-cA
32 4mgr-a2-m1-cD 472 61 0.3247 0.0530 0.4098 4.36e-05 4mgr-a2-m1-cD_4mgr-a2-m1-cC
33 4mgr-a2-m1-cC 475 61 0.3247 0.0526 0.4098 4.40e-05 4mgr-a2-m1-cD_4mgr-a2-m1-cC
34 1hw1-a1-m1-cB 226 53 0.2857 0.0973 0.4151 4.81e-05 1hw1-a1-m1-cA_1hw1-a1-m1-cB
35 1hw1-a1-m1-cA 226 53 0.2857 0.0973 0.4151 4.81e-05 1hw1-a1-m1-cA_1hw1-a1-m1-cB
36 3c7j-a1-m2-cB 222 61 0.3506 0.1216 0.4426 9.74e-05 3c7j-a1-m2-cB_3c7j-a1-m1-cA, 3c7j-a1-m2-cB_3c7j-a1-m2-cA
37 6ep3-a1-m1-cB 218 49 0.2727 0.0963 0.4286 9.86e-05 6ep3-a1-m1-cA_6ep3-a1-m1-cB
38 3c7j-a1-m2-cA 232 61 0.3506 0.1164 0.4426 1.09e-04 3c7j-a1-m2-cB_3c7j-a1-m2-cA
39 3c7j-a1-m1-cA 232 61 0.3506 0.1164 0.4426 1.09e-04 3c7j-a1-m2-cB_3c7j-a1-m1-cA
40 6ep3-a1-m1-cA 215 49 0.2727 0.0977 0.4286 1.15e-04 6ep3-a1-m1-cA_6ep3-a1-m1-cB
41 3edp-a1-m1-cA 217 41 0.1948 0.0691 0.3659 0.006 3edp-a1-m1-cB_3edp-a1-m1-cA
42 3edp-a1-m1-cB 214 41 0.1948 0.0701 0.3659 0.007 3edp-a1-m1-cB_3edp-a1-m1-cA
43 4r1h-a1-m1-cA 115 52 0.2078 0.1391 0.3077 0.008 4r1h-a1-m1-cB_4r1h-a1-m1-cA
44 4r1h-a1-m1-cB 113 52 0.2078 0.1416 0.3077 0.008 4r1h-a1-m1-cB_4r1h-a1-m1-cA
45 7wjg-a1-m2-cA 199 52 0.2338 0.0905 0.3462 0.011 7wjg-a1-m1-cA_7wjg-a1-m2-cA, 7wjg-a1-m2-cB_7wjg-a1-m2-cA
46 7wjg-a1-m1-cA 199 52 0.2338 0.0905 0.3462 0.011 7wjg-a1-m1-cA_7wjg-a1-m2-cA, 7wjg-a1-m2-cB_7wjg-a1-m1-cA
47 7wjg-a1-m2-cB 198 52 0.2338 0.0909 0.3462 0.011 7wjg-a1-m1-cB_7wjg-a1-m2-cB, 7wjg-a1-m2-cB_7wjg-a1-m1-cA, 7wjg-a1-m2-cB_7wjg-a1-m2-cA
48 7wjg-a1-m1-cB 198 52 0.2338 0.0909 0.3462 0.011 7wjg-a1-m1-cB_7wjg-a1-m2-cB
49 4aik-a1-m1-cA 139 48 0.2338 0.1295 0.3750 0.021 4aik-a1-m1-cA_4aik-a1-m1-cB
50 3deu-a2-m3-cB 130 44 0.2338 0.1385 0.4091 0.021 3deu-a2-m1-cB_3deu-a2-m3-cB
51 3deu-a2-m1-cB 130 44 0.2338 0.1385 0.4091 0.021 3deu-a2-m1-cB_3deu-a2-m3-cB
52 4aik-a1-m1-cB 142 48 0.2338 0.1268 0.3750 0.022 4aik-a1-m1-cA_4aik-a1-m1-cB
53 3qpt-a1-m2-cA 130 44 0.2208 0.1308 0.3864 0.083 3qpt-a1-m1-cA_3qpt-a1-m2-cA
54 3qpt-a1-m1-cA 130 44 0.2208 0.1308 0.3864 0.083 3qpt-a1-m1-cA_3qpt-a1-m2-cA
55 2ek5-a4-m3-cD 114 57 0.2078 0.1404 0.2807 0.12 2ek5-a4-m1-cD_2ek5-a4-m3-cD
56 2ek5-a4-m1-cD 114 57 0.2078 0.1404 0.2807 0.12 2ek5-a4-m1-cD_2ek5-a4-m3-cD
57 2ek5-a3-m2-cA 114 57 0.2078 0.1404 0.2807 0.12 2ek5-a3-m2-cB_2ek5-a3-m2-cA
58 2ek5-a3-m2-cB 108 53 0.1948 0.1389 0.2830 0.22 2ek5-a3-m2-cB_2ek5-a3-m2-cA
59 2we4-a2-m1-cC 309 72 0.3117 0.0777 0.3333 0.28 2we4-a2-m1-cA_2we4-a2-m1-cC
60 2we4-a2-m1-cA 309 72 0.3117 0.0777 0.3333 0.28 2we4-a2-m1-cA_2we4-a2-m1-cC
61 3by6-a1-m1-cA 119 47 0.1948 0.1261 0.3191 0.41 3by6-a1-m1-cA_3by6-a1-m1-cD
62 3by6-a1-m1-cD 121 47 0.1948 0.1240 0.3191 0.49 3by6-a1-m1-cA_3by6-a1-m1-cD
63 3f6o-a2-m2-cA 97 32 0.1688 0.1340 0.4062 1.1 3f6o-a2-m1-cA_3f6o-a2-m2-cA
64 3f6o-a2-m1-cA 97 32 0.1688 0.1340 0.4062 1.1 3f6o-a2-m1-cA_3f6o-a2-m2-cA
65 3f6o-a1-m1-cA 97 32 0.1688 0.1340 0.4062 1.1 3f6o-a1-m1-cB_3f6o-a1-m1-cA
66 7q62-a1-m1-cB 822 17 0.1429 0.0134 0.6471 1.1 7q62-a1-m1-cB_7q62-a1-m1-cA
67 7q62-a1-m1-cA 1223 17 0.1429 0.0090 0.6471 1.1 7q62-a1-m1-cB_7q62-a1-m1-cA
68 3f6o-a1-m1-cB 91 32 0.1688 0.1429 0.4062 1.2 3f6o-a1-m1-cB_3f6o-a1-m1-cA
69 3f3x-a1-m2-cA 139 48 0.2208 0.1223 0.3542 1.6 3f3x-a1-m1-cA_3f3x-a1-m2-cA
70 3f3x-a1-m1-cA 139 48 0.2208 0.1223 0.3542 1.6 3f3x-a1-m1-cA_3f3x-a1-m2-cA
71 2fbh-a2-m3-cA 137 57 0.2468 0.1387 0.3333 1.9 2fbh-a2-m1-cA_2fbh-a2-m3-cA
72 2fbh-a2-m1-cA 137 57 0.2468 0.1387 0.3333 1.9 2fbh-a2-m1-cA_2fbh-a2-m3-cA
73 2fbh-a1-m2-cA 137 57 0.2468 0.1387 0.3333 1.9 2fbh-a1-m1-cA_2fbh-a1-m2-cA
74 2fbh-a1-m1-cA 137 57 0.2468 0.1387 0.3333 1.9 2fbh-a1-m1-cA_2fbh-a1-m2-cA
75 5aiq-a2-m1-cA 131 29 0.1688 0.0992 0.4483 2.1 5aiq-a2-m1-cA_5aiq-a2-m1-cB
76 5aiq-a2-m1-cB 132 29 0.1688 0.0985 0.4483 2.4 5aiq-a2-m1-cA_5aiq-a2-m1-cB
77 5ey0-a1-m1-cB 253 77 0.2468 0.0751 0.2468 3.1 5ey0-a1-m1-cA_5ey0-a1-m1-cB
78 3qbd-a1-m1-cA 344 37 0.1299 0.0291 0.2703 3.7 3qbd-a1-m1-cB_3qbd-a1-m1-cA
79 2p7v-a2-m2-cB 68 25 0.1688 0.1912 0.5200 5.5 2p7v-a2-m1-cB_2p7v-a2-m2-cB
80 2p7v-a2-m1-cB 68 25 0.1688 0.1912 0.5200 5.5 2p7v-a2-m1-cB_2p7v-a2-m2-cB
81 1h48-a1-m1-cA 157 33 0.1948 0.0955 0.4545 6.3 1h48-a1-m1-cA_1h48-a1-m1-cB
82 1h48-a1-m1-cB 158 33 0.1948 0.0949 0.4545 6.3 1h48-a1-m1-cA_1h48-a1-m1-cB
83 3zpl-a2-m1-cF 154 28 0.1558 0.0779 0.4286 8.6 3zpl-a2-m1-cF_3zpl-a2-m1-cE
84 3ivt-a1-m1-cA 398 26 0.1429 0.0276 0.4231 8.7 3ivt-a1-m1-cA_3ivt-a1-m1-cB
85 3ivt-a1-m1-cB 400 26 0.1429 0.0275 0.4231 8.7 3ivt-a1-m1-cA_3ivt-a1-m1-cB
86 3zpl-a2-m1-cE 160 28 0.1558 0.0750 0.4286 9.0 3zpl-a2-m1-cF_3zpl-a2-m1-cE
87 2x4h-a1-m1-cC 131 31 0.1299 0.0763 0.3226 9.2 2x4h-a1-m1-cB_2x4h-a1-m1-cC, 2x4h-a1-m1-cD_2x4h-a1-m1-cC
88 2x4h-a1-m1-cB 130 31 0.1299 0.0769 0.3226 9.6 2x4h-a1-m1-cB_2x4h-a1-m1-cC, 2x4h-a1-m1-cD_2x4h-a1-m1-cB
89 2x4h-a1-m1-cD 129 31 0.1299 0.0775 0.3226 9.7 2x4h-a1-m1-cD_2x4h-a1-m1-cB, 2x4h-a1-m1-cD_2x4h-a1-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600