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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=72)
NARRNEDSWLIDGATPLEDVRALNIHTFPRDENYETIGGFYLRIPTDFVLYDYFEIIDTE
NFRIDQLVSFRD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2p4p-a1-m1-cA 72 72 1.0000 1.0000 1.0000 2.89e-48 2p4p-a1-m1-cB_2p4p-a1-m1-cA
2 2p4p-a1-m1-cB 66 66 0.9167 1.0000 1.0000 1.38e-43 2p4p-a1-m1-cB_2p4p-a1-m1-cA
3 2oai-a1-m2-cA 77 73 0.3333 0.3117 0.3288 0.002 2oai-a1-m1-cA_2oai-a1-m2-cA
4 2oai-a1-m1-cA 77 73 0.3333 0.3117 0.3288 0.002 2oai-a1-m1-cA_2oai-a1-m2-cA
5 2pls-a6-m2-cL 83 81 0.3472 0.3012 0.3086 0.004 2pls-a6-m1-cL_2pls-a6-m2-cL
6 2pls-a6-m1-cL 83 81 0.3472 0.3012 0.3086 0.004 2pls-a6-m1-cL_2pls-a6-m2-cL
7 2pls-a1-m1-cC 83 81 0.3472 0.3012 0.3086 0.004 2pls-a1-m1-cB_2pls-a1-m1-cC
8 2pls-a1-m1-cB 83 81 0.3472 0.3012 0.3086 0.004 2pls-a1-m1-cB_2pls-a1-m1-cC
9 2nvw-a3-m3-cB 405 40 0.1667 0.0296 0.3000 1.3 2nvw-a3-m1-cB_2nvw-a3-m3-cB, 2nvw-a3-m3-cB_2nvw-a3-m3-cA
10 2nvw-a3-m1-cB 405 40 0.1667 0.0296 0.3000 1.3 2nvw-a3-m1-cB_2nvw-a3-m3-cB
11 5ejs-a1-m1-cA 496 41 0.1944 0.0282 0.3415 3.6 5ejs-a1-m1-cB_5ejs-a1-m1-cA
12 5ejs-a1-m1-cB 485 41 0.1944 0.0289 0.3415 3.6 5ejs-a1-m1-cB_5ejs-a1-m1-cA
13 4whb-a2-m2-cH 459 56 0.2361 0.0370 0.3036 3.8 4whb-a2-m1-cF_4whb-a2-m2-cH, 4whb-a2-m2-cC_4whb-a2-m2-cH
14 4whb-a2-m2-cC 459 56 0.2361 0.0370 0.3036 3.8 4whb-a2-m2-cC_4whb-a2-m2-cH
15 4whb-a2-m1-cF 459 56 0.2361 0.0370 0.3036 3.8 4whb-a2-m1-cF_4whb-a2-m2-cH
16 8d7h-a1-m1-cE 303 25 0.1389 0.0330 0.4000 6.6 8d7h-a1-m1-cA_8d7h-a1-m1-cE
17 8d7h-a1-m1-cA 303 25 0.1389 0.0330 0.4000 6.6 8d7h-a1-m1-cA_8d7h-a1-m1-cE
18 3pf9-a1-m2-cA 251 17 0.1250 0.0359 0.5294 8.8 3pf9-a1-m1-cA_3pf9-a1-m2-cA
19 3pf9-a1-m1-cA 251 17 0.1250 0.0359 0.5294 8.8 3pf9-a1-m1-cA_3pf9-a1-m2-cA
20 3nic-a2-m1-cB 210 40 0.1389 0.0476 0.2500 8.9 3nic-a2-m1-cD_3nic-a2-m1-cB
21 3nic-a2-m1-cD 209 40 0.1389 0.0478 0.2500 9.1 3nic-a2-m1-cD_3nic-a2-m1-cB

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Reference:
Jacob Schwartz et al.

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