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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=59)
NDAEGVWSPDIEQSFQEALSIYPGKMYGRNELIARYIKLRTGKTRTRKQVSSHIQVLAR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4z8e-a4-m2-cA 59 59 1.0000 1.0000 1.0000 9.24e-40 4z8e-a4-m2-cC_4z8e-a4-m2-cA
2 4z8e-a4-m1-cB 58 58 0.9831 1.0000 1.0000 9.35e-39 4z8e-a4-m2-cC_4z8e-a4-m1-cB
3 4z8e-a4-m2-cC 55 55 0.9322 1.0000 1.0000 2.74e-36 4z8e-a4-m2-cC_4z8e-a4-m1-cB, 4z8e-a4-m2-cC_4z8e-a4-m2-cA
4 5nnx-a1-m3-cA 74 69 0.9492 0.7568 0.8116 1.20e-33 5nnx-a1-m2-cA_5nnx-a1-m3-cA
5 5nnx-a1-m2-cA 74 69 0.9492 0.7568 0.8116 1.20e-33 5nnx-a1-m2-cA_5nnx-a1-m3-cA
6 6om8-a1-m1-cD 468 48 0.2881 0.0363 0.3542 1.4 6om8-a1-m1-cB_6om8-a1-m1-cD, 6om8-a1-m1-cC_6om8-a1-m1-cD
7 6om8-a1-m1-cC 463 48 0.2881 0.0367 0.3542 1.5 6om8-a1-m1-cC_6om8-a1-m1-cD
8 6om8-a1-m1-cB 463 48 0.2881 0.0367 0.3542 1.5 6om8-a1-m1-cB_6om8-a1-m1-cD
9 7uoi-a1-m2-cA 383 31 0.2373 0.0366 0.4516 2.2 7uoi-a1-m1-cA_7uoi-a1-m2-cA
10 7uoi-a1-m1-cA 383 31 0.2373 0.0366 0.4516 2.2 7uoi-a1-m1-cA_7uoi-a1-m2-cA
11 6ms3-a1-m1-cB 511 11 0.1186 0.0137 0.6364 4.7 6ms3-a1-m1-cB_6ms3-a1-m1-cA
12 6ms3-a1-m1-cA 512 11 0.1186 0.0137 0.6364 4.7 6ms3-a1-m1-cB_6ms3-a1-m1-cA
13 5ic7-a2-m2-cA 340 34 0.2203 0.0382 0.3824 7.1 5ic7-a2-m1-cA_5ic7-a2-m2-cA
14 5ic7-a2-m1-cA 340 34 0.2203 0.0382 0.3824 7.1 5ic7-a2-m1-cA_5ic7-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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