Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=99)
NDAMLVLISYDVSFEDPGGQRRLRRIAKACQDYGQRVQYSVFECVVDPAQWAKLKHRLLS
EMDKEKDCLRFYYLGANWRNKVEHVGAKPAYDPEGPLIL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3oq2-a3-m3-cA 99 99 1.0000 1.0000 1.0000 1.32e-71 3oq2-a3-m3-cA_3oq2-a3-m4-cB
2 3oq2-a3-m1-cA 99 99 1.0000 1.0000 1.0000 1.32e-71 3oq2-a3-m1-cA_3oq2-a3-m4-cB
3 3oq2-a2-m2-cA 99 99 1.0000 1.0000 1.0000 1.32e-71 3oq2-a2-m2-cA_3oq2-a2-m2-cB
4 3oq2-a3-m4-cB 102 99 1.0000 0.9706 1.0000 1.73e-71 3oq2-a3-m1-cA_3oq2-a3-m4-cB, 3oq2-a3-m3-cA_3oq2-a3-m4-cB
5 3oq2-a2-m2-cB 102 99 1.0000 0.9706 1.0000 1.73e-71 3oq2-a2-m2-cA_3oq2-a2-m2-cB
6 8d3q-a1-m1-cF 98 97 0.5960 0.6020 0.6082 3.53e-41 8d3q-a1-m1-cE_8d3q-a1-m1-cF
7 8d3q-a1-m1-cE 98 97 0.5960 0.6020 0.6082 3.53e-41 8d3q-a1-m1-cE_8d3q-a1-m1-cF
8 5h1o-a1-m1-cA 86 86 0.5556 0.6395 0.6395 9.66e-38 5h1o-a1-m1-cB_5h1o-a1-m1-cA
9 4es1-a1-m2-cA 95 96 0.5758 0.6000 0.5938 1.56e-37 4es1-a1-m1-cA_4es1-a1-m2-cA
10 4es1-a1-m1-cA 95 96 0.5758 0.6000 0.5938 1.56e-37 4es1-a1-m1-cA_4es1-a1-m2-cA
11 5h1o-a1-m1-cB 83 85 0.5455 0.6506 0.6353 1.24e-34 5h1o-a1-m1-cB_5h1o-a1-m1-cA
12 4qr2-a1-m1-cA 83 83 0.4646 0.5542 0.5542 3.40e-32 4qr2-a1-m1-cB_4qr2-a1-m1-cA
13 4qr2-a1-m1-cB 82 80 0.4545 0.5488 0.5625 3.09e-31 4qr2-a1-m1-cB_4qr2-a1-m1-cA
14 7f84-a1-m1-cB 89 86 0.3333 0.3708 0.3837 3.31e-18 7f84-a1-m1-cA_7f84-a1-m1-cB
15 7f84-a1-m1-cA 89 86 0.3333 0.3708 0.3837 3.31e-18 7f84-a1-m1-cA_7f84-a1-m1-cB
16 7cr8-a6-m1-cF 93 93 0.3131 0.3333 0.3333 7.94e-08 7cr8-a6-m1-cE_7cr8-a6-m1-cF
17 7cr8-a6-m1-cE 93 93 0.3131 0.3333 0.3333 7.94e-08 7cr8-a6-m1-cE_7cr8-a6-m1-cF
18 7mid-a1-m1-cD 91 91 0.2727 0.2967 0.2967 8.50e-05 7mid-a1-m1-cD_7mid-a1-m1-cC
19 7mid-a1-m1-cC 95 91 0.2727 0.2842 0.2967 9.04e-05 7mid-a1-m1-cD_7mid-a1-m1-cC
20 1zpw-a2-m2-cX 82 80 0.2828 0.3415 0.3500 3.12e-04 1zpw-a2-m1-cX_1zpw-a2-m2-cX
21 1zpw-a2-m1-cX 82 80 0.2828 0.3415 0.3500 3.12e-04 1zpw-a2-m1-cX_1zpw-a2-m2-cX
22 7kfu-a1-m1-cB 96 97 0.2323 0.2396 0.2371 0.004 7kfu-a1-m1-cA_7kfu-a1-m1-cB
23 7kfu-a1-m1-cA 96 97 0.2323 0.2396 0.2371 0.004 7kfu-a1-m1-cA_7kfu-a1-m1-cB
24 6k2e-a1-m1-cA 88 75 0.2323 0.2614 0.3067 0.011 6k2e-a1-m1-cB_6k2e-a1-m1-cA
25 6k2e-a1-m1-cB 87 75 0.2323 0.2644 0.3067 0.012 6k2e-a1-m1-cB_6k2e-a1-m1-cA
26 3ic8-a3-m1-cD 267 32 0.1212 0.0449 0.3750 7.3 3ic8-a3-m1-cC_3ic8-a3-m1-cD
27 3ic8-a1-m1-cD 267 32 0.1212 0.0449 0.3750 7.3 3ic8-a1-m1-cD_3ic8-a1-m1-cB
28 6mjg-a1-m2-cA 382 43 0.1313 0.0340 0.3023 9.8 6mjg-a1-m1-cA_6mjg-a1-m2-cA
29 6mjg-a1-m1-cA 382 43 0.1313 0.0340 0.3023 9.8 6mjg-a1-m1-cA_6mjg-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600