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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=99)
NDAMLVLISYDVSFEDPGGQRRLRRIAKACQDYGQRVQYSVFECVVDPAQWAKLKHRLLS
EMDKEKDCLRFYYLGANWRNKVEHVGAKPAYDPEGPLIL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3oq2-a3-m3-cA 99 99 1.0000 1.0000 1.0000 1.32e-71 3oq2-a3-m3-cA_3oq2-a3-m4-cB
2 3oq2-a3-m1-cA 99 99 1.0000 1.0000 1.0000 1.32e-71 3oq2-a3-m1-cA_3oq2-a3-m4-cB
3 3oq2-a2-m2-cA 99 99 1.0000 1.0000 1.0000 1.32e-71 3oq2-a2-m2-cA_3oq2-a2-m2-cB
4 3oq2-a3-m4-cB 102 99 1.0000 0.9706 1.0000 1.73e-71 3oq2-a3-m1-cA_3oq2-a3-m4-cB, 3oq2-a3-m3-cA_3oq2-a3-m4-cB
5 3oq2-a2-m2-cB 102 99 1.0000 0.9706 1.0000 1.73e-71 3oq2-a2-m2-cA_3oq2-a2-m2-cB
6 8d3q-a1-m1-cF 98 97 0.5960 0.6020 0.6082 3.53e-41 8d3q-a1-m1-cE_8d3q-a1-m1-cF
7 8d3q-a1-m1-cE 98 97 0.5960 0.6020 0.6082 3.53e-41 8d3q-a1-m1-cE_8d3q-a1-m1-cF
8 5h1o-a1-m1-cA 86 86 0.5556 0.6395 0.6395 9.66e-38 5h1o-a1-m1-cB_5h1o-a1-m1-cA
9 4es1-a1-m2-cA 95 96 0.5758 0.6000 0.5938 1.56e-37 4es1-a1-m1-cA_4es1-a1-m2-cA
10 4es1-a1-m1-cA 95 96 0.5758 0.6000 0.5938 1.56e-37 4es1-a1-m1-cA_4es1-a1-m2-cA
11 5h1o-a1-m1-cB 83 85 0.5455 0.6506 0.6353 1.24e-34 5h1o-a1-m1-cB_5h1o-a1-m1-cA
12 4qr2-a1-m1-cA 83 83 0.4646 0.5542 0.5542 3.40e-32 4qr2-a1-m1-cB_4qr2-a1-m1-cA
13 4qr2-a1-m1-cB 82 80 0.4545 0.5488 0.5625 3.09e-31 4qr2-a1-m1-cB_4qr2-a1-m1-cA
14 7f84-a1-m1-cB 89 86 0.3333 0.3708 0.3837 3.31e-18 7f84-a1-m1-cA_7f84-a1-m1-cB
15 7f84-a1-m1-cA 89 86 0.3333 0.3708 0.3837 3.31e-18 7f84-a1-m1-cA_7f84-a1-m1-cB
16 7cr8-a6-m1-cF 93 93 0.3131 0.3333 0.3333 7.94e-08 7cr8-a6-m1-cE_7cr8-a6-m1-cF
17 7cr8-a6-m1-cE 93 93 0.3131 0.3333 0.3333 7.94e-08 7cr8-a6-m1-cE_7cr8-a6-m1-cF
18 7mid-a1-m1-cD 91 91 0.2727 0.2967 0.2967 8.50e-05 7mid-a1-m1-cD_7mid-a1-m1-cC
19 7mid-a1-m1-cC 95 91 0.2727 0.2842 0.2967 9.04e-05 7mid-a1-m1-cD_7mid-a1-m1-cC
20 1zpw-a2-m2-cX 82 80 0.2828 0.3415 0.3500 3.12e-04 1zpw-a2-m1-cX_1zpw-a2-m2-cX
21 1zpw-a2-m1-cX 82 80 0.2828 0.3415 0.3500 3.12e-04 1zpw-a2-m1-cX_1zpw-a2-m2-cX
22 7kfu-a1-m1-cB 96 97 0.2323 0.2396 0.2371 0.004 7kfu-a1-m1-cA_7kfu-a1-m1-cB
23 7kfu-a1-m1-cA 96 97 0.2323 0.2396 0.2371 0.004 7kfu-a1-m1-cA_7kfu-a1-m1-cB
24 6k2e-a1-m1-cA 88 75 0.2323 0.2614 0.3067 0.011 6k2e-a1-m1-cB_6k2e-a1-m1-cA
25 6k2e-a1-m1-cB 87 75 0.2323 0.2644 0.3067 0.012 6k2e-a1-m1-cB_6k2e-a1-m1-cA
26 3ic8-a3-m1-cD 267 32 0.1212 0.0449 0.3750 7.3 3ic8-a3-m1-cC_3ic8-a3-m1-cD
27 3ic8-a1-m1-cD 267 32 0.1212 0.0449 0.3750 7.3 3ic8-a1-m1-cD_3ic8-a1-m1-cB
28 6mjg-a1-m2-cA 382 43 0.1313 0.0340 0.3023 9.8 6mjg-a1-m1-cA_6mjg-a1-m2-cA
29 6mjg-a1-m1-cA 382 43 0.1313 0.0340 0.3023 9.8 6mjg-a1-m1-cA_6mjg-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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