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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=84)
NDKKIELLTTYLSLYIDHHTVLADKYVVLDVRNAIKGAIAPAKDLATRIGELDPAKTYVV
YDTTLGKTALLVLLSAGFEAYELA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3i3u-a1-m1-cB 84 84 1.0000 1.0000 1.0000 9.10e-55 3i3u-a1-m1-cC_3i3u-a1-m1-cB
2 3i3u-a1-m1-cC 82 84 0.9643 0.9878 0.9643 9.92e-51 3i3u-a1-m1-cC_3i3u-a1-m1-cB
3 3fnj-a1-m1-cB 117 101 1.0000 0.7179 0.8317 3.45e-47 3fnj-a1-m1-cA_3fnj-a1-m1-cB
4 3fnj-a1-m1-cA 116 101 1.0000 0.7241 0.8317 3.65e-47 3fnj-a1-m1-cA_3fnj-a1-m1-cB
5 8a56-a1-m1-cB 539 41 0.2262 0.0353 0.4634 0.12 8a56-a1-m1-cA_8a56-a1-m1-cB
6 8a56-a1-m1-cA 538 42 0.2143 0.0335 0.4286 0.65 8a56-a1-m1-cA_8a56-a1-m1-cB
7 3pij-a1-m1-cA 523 60 0.1905 0.0306 0.2667 2.1 3pij-a1-m1-cA_3pij-a1-m1-cB
8 3pij-a1-m1-cB 526 60 0.1905 0.0304 0.2667 2.2 3pij-a1-m1-cA_3pij-a1-m1-cB
9 3i5t-a1-m1-cB 442 49 0.1905 0.0362 0.3265 2.7 3i5t-a1-m1-cB_3i5t-a1-m1-cA
10 3i5t-a1-m1-cA 444 49 0.1905 0.0360 0.3265 2.9 3i5t-a1-m1-cB_3i5t-a1-m1-cA
11 5ubu-a1-m1-cD 314 23 0.0952 0.0255 0.3478 9.0 5ubu-a1-m1-cD_5ubu-a1-m1-cA, 5ubu-a1-m1-cD_5ubu-a1-m1-cB, 5ubu-a1-m1-cD_5ubu-a1-m1-cC
12 5ubu-a1-m1-cC 315 23 0.0952 0.0254 0.3478 9.0 5ubu-a1-m1-cD_5ubu-a1-m1-cC
13 5ubu-a1-m1-cA 315 23 0.0952 0.0254 0.3478 9.0 5ubu-a1-m1-cD_5ubu-a1-m1-cA
14 5ubu-a1-m1-cB 316 23 0.0952 0.0253 0.3478 9.0 5ubu-a1-m1-cD_5ubu-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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