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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
NEQLAKQKGCMACHDLKAGGGKKVGPAYADVAKKYAGRKDAVDYLAGKIKKGGSGVWGSV
PMPPQNVTDAEAKQLAQWILSIK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5aus-a1-m1-cC 83 83 1.0000 1.0000 1.0000 8.17e-56 5aus-a1-m1-cA_5aus-a1-m1-cC
2 5aur-a2-m1-cG 83 83 1.0000 1.0000 1.0000 8.17e-56 5aur-a2-m1-cE_5aur-a2-m1-cG
3 5aur-a2-m1-cE 83 83 1.0000 1.0000 1.0000 8.17e-56 5aur-a2-m1-cE_5aur-a2-m1-cG
4 4zid-a1-m2-cA 80 83 0.9639 1.0000 0.9639 1.23e-51 4zid-a1-m1-cA_4zid-a1-m2-cA
5 4zid-a1-m1-cA 80 83 0.9639 1.0000 0.9639 1.23e-51 4zid-a1-m1-cA_4zid-a1-m2-cA
6 1ynr-a1-m1-cC 80 83 0.9639 1.0000 0.9639 1.23e-51 1ynr-a1-m1-cA_1ynr-a1-m1-cC, 1ynr-a1-m1-cD_1ynr-a1-m1-cC
7 1ynr-a1-m1-cA 80 83 0.9639 1.0000 0.9639 1.23e-51 1ynr-a1-m1-cA_1ynr-a1-m1-cC, 1ynr-a1-m1-cD_1ynr-a1-m1-cA
8 1ynr-a1-m1-cD 79 82 0.9518 1.0000 0.9634 4.81e-51 1ynr-a1-m1-cD_1ynr-a1-m1-cA, 1ynr-a1-m1-cD_1ynr-a1-m1-cC
9 5aus-a1-m1-cA 79 83 0.9518 1.0000 0.9518 6.84e-51 5aus-a1-m1-cA_5aus-a1-m1-cC
10 3x39-a2-m3-cB 82 82 0.5422 0.5488 0.5488 2.06e-24 3x39-a2-m1-cB_3x39-a2-m3-cB
11 3x39-a2-m1-cB 82 82 0.5422 0.5488 0.5488 2.06e-24 3x39-a2-m1-cB_3x39-a2-m3-cB
12 3x15-a2-m1-cJ 87 86 0.3494 0.3333 0.3372 4.18e-05 3x15-a2-m1-cD_3x15-a2-m1-cJ
13 3x15-a2-m1-cD 87 86 0.3494 0.3333 0.3372 4.18e-05 3x15-a2-m1-cD_3x15-a2-m1-cJ
14 3x15-a1-m1-cG 87 86 0.3494 0.3333 0.3372 4.18e-05 3x15-a1-m1-cA_3x15-a1-m1-cG
15 3x15-a1-m1-cA 87 86 0.3494 0.3333 0.3372 4.18e-05 3x15-a1-m1-cA_3x15-a1-m1-cG
16 2zxy-a1-m2-cA 86 84 0.3373 0.3256 0.3333 5.09e-05 2zxy-a1-m1-cA_2zxy-a1-m2-cA
17 2zxy-a1-m1-cA 86 84 0.3373 0.3256 0.3333 5.09e-05 2zxy-a1-m1-cA_2zxy-a1-m2-cA
18 5z25-a1-m3-cA 96 46 0.2048 0.1771 0.3696 0.004 5z25-a1-m2-cA_5z25-a1-m3-cA
19 5z25-a1-m2-cA 96 46 0.2048 0.1771 0.3696 0.004 5z25-a1-m2-cA_5z25-a1-m3-cA
20 1yeb-a1-m2-cA 107 42 0.1566 0.1215 0.3095 0.047 1yeb-a1-m1-cA_1yeb-a1-m2-cA
21 1yeb-a1-m1-cA 107 42 0.1566 0.1215 0.3095 0.047 1yeb-a1-m1-cA_1yeb-a1-m2-cA
22 1yea-a1-m2-cA 111 42 0.1566 0.1171 0.3095 0.047 1yea-a1-m1-cA_1yea-a1-m2-cA
23 1yea-a1-m1-cA 111 42 0.1566 0.1171 0.3095 0.047 1yea-a1-m1-cA_1yea-a1-m2-cA
24 6xnk-a2-m1-cG 104 50 0.1807 0.1442 0.3000 0.92 6xnk-a2-m1-cE_6xnk-a2-m1-cG
25 6xnk-a2-m1-cE 104 50 0.1807 0.1442 0.3000 0.92 6xnk-a2-m1-cE_6xnk-a2-m1-cG
26 3o5c-a2-m1-cC 304 19 0.1325 0.0362 0.5789 1.4 3o5c-a2-m1-cC_3o5c-a2-m1-cD
27 3o5c-a2-m1-cD 307 19 0.1325 0.0358 0.5789 1.5 3o5c-a2-m1-cC_3o5c-a2-m1-cD
28 2p91-a1-m1-cC 228 67 0.2410 0.0877 0.2985 2.0 2p91-a1-m1-cC_2p91-a1-m1-cD
29 3vh3-a1-m2-cA 320 18 0.1205 0.0312 0.5556 2.2 3vh3-a1-m1-cA_3vh3-a1-m2-cA
30 3vh3-a1-m1-cA 320 18 0.1205 0.0312 0.5556 2.2 3vh3-a1-m1-cA_3vh3-a1-m2-cA
31 5o10-a1-m1-cB 104 50 0.1687 0.1346 0.2800 4.3 5o10-a1-m1-cA_5o10-a1-m1-cB
32 5o10-a1-m1-cA 104 50 0.1687 0.1346 0.2800 4.3 5o10-a1-m1-cA_5o10-a1-m1-cB
33 1o6i-a1-m1-cB 497 23 0.1325 0.0221 0.4783 6.6 1o6i-a1-m1-cA_1o6i-a1-m1-cB
34 1o6i-a1-m1-cA 496 23 0.1325 0.0222 0.4783 6.8 1o6i-a1-m1-cA_1o6i-a1-m1-cB
35 4rsz-a7-m3-cF 104 43 0.1446 0.1154 0.2791 8.7 4rsz-a7-m3-cD_4rsz-a7-m3-cF
36 4rsz-a7-m3-cD 104 43 0.1446 0.1154 0.2791 8.7 4rsz-a7-m1-cA_4rsz-a7-m3-cD, 4rsz-a7-m3-cD_4rsz-a7-m3-cF
37 4rsz-a7-m1-cA 104 43 0.1446 0.1154 0.2791 8.7 4rsz-a7-m1-cA_4rsz-a7-m3-cD
38 3wc8-a1-m2-cA 104 43 0.1446 0.1154 0.2791 8.7 3wc8-a1-m1-cA_3wc8-a1-m2-cA
39 3wc8-a1-m1-cA 104 43 0.1446 0.1154 0.2791 8.7 3wc8-a1-m1-cA_3wc8-a1-m2-cA
40 3nbt-a1-m1-cF 104 43 0.1446 0.1154 0.2791 8.7 3nbt-a1-m1-cE_3nbt-a1-m1-cF
41 3nbt-a1-m1-cE 104 43 0.1446 0.1154 0.2791 8.7 3nbt-a1-m1-cE_3nbt-a1-m1-cF

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Reference:
Jacob Schwartz et al.

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