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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=31)
NESGNEGVIINNFYSNQYQNSIDLSALSNLL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1tmf-a1-m9-c4 31 31 1.0000 1.0000 1.0000 6.59e-15 1tmf-a1-m8-c4_1tmf-a1-m9-c4
2 1tmf-a1-m8-c4 31 31 1.0000 1.0000 1.0000 6.59e-15 1tmf-a1-m8-c4_1tmf-a1-m9-c4
3 7eo0-a1-m9-c4 44 21 0.4839 0.3409 0.7143 1.47e-04 7eo0-a1-m8-c4_7eo0-a1-m9-c4
4 7eo0-a1-m8-c4 44 21 0.4839 0.3409 0.7143 1.47e-04 7eo0-a1-m8-c4_7eo0-a1-m9-c4
5 2ws9-a1-m9-c4 21 20 0.4516 0.6667 0.7000 7.75e-04 2ws9-a1-m8-c4_2ws9-a1-m9-c4
6 2ws9-a1-m8-c4 21 20 0.4516 0.6667 0.7000 7.75e-04 2ws9-a1-m8-c4_2ws9-a1-m9-c4
7 1zba-a1-m9-c4 49 20 0.4516 0.2857 0.7000 0.002 1zba-a1-m8-c4_1zba-a1-m9-c4
8 1zba-a1-m8-c4 49 20 0.4516 0.2857 0.7000 0.002 1zba-a1-m8-c4_1zba-a1-m9-c4
9 3bs3-a1-m2-cA 58 30 0.3548 0.1897 0.3667 5.3 3bs3-a1-m1-cA_3bs3-a1-m2-cA
10 3bs3-a1-m1-cA 58 30 0.3548 0.1897 0.3667 5.3 3bs3-a1-m1-cA_3bs3-a1-m2-cA
11 1xls-a7-m4-cH 242 22 0.3548 0.0455 0.5000 7.2 1xls-a7-m1-cF_1xls-a7-m4-cH
12 1xls-a7-m1-cF 242 22 0.3548 0.0455 0.5000 7.2 1xls-a7-m1-cF_1xls-a7-m4-cH

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Reference:
Jacob Schwartz et al.

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