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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=77)
NESLKKFLNTKDGRLVASLVAEFLQFFNLDFTLAVFQPETSTLQGLEGRENLARDLGIIE
AEGTVGGPLLLEVIRRW

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2d68-a2-m2-cB 77 77 1.0000 1.0000 1.0000 2.14e-50 2d68-a2-m1-cA_2d68-a2-m2-cB, 2d68-a2-m2-cA_2d68-a2-m2-cB
2 2d68-a2-m2-cA 75 77 0.9610 0.9867 0.9610 4.62e-46 2d68-a2-m2-cA_2d68-a2-m2-cB
3 2d68-a2-m1-cA 75 77 0.9610 0.9867 0.9610 4.62e-46 2d68-a2-m1-cA_2d68-a2-m2-cB
4 5en8-a1-m1-cA 172 37 0.1818 0.0814 0.3784 6.0 5en8-a1-m1-cA_5en8-a1-m1-cB
5 5en8-a1-m1-cB 173 37 0.1818 0.0809 0.3784 6.3 5en8-a1-m1-cA_5en8-a1-m1-cB
6 5en6-a1-m2-cA 175 37 0.1818 0.0800 0.3784 6.8 5en6-a1-m1-cA_5en6-a1-m2-cA
7 5en6-a1-m1-cA 175 37 0.1818 0.0800 0.3784 6.8 5en6-a1-m1-cA_5en6-a1-m2-cA
8 3zds-a5-m13-cK 426 51 0.2468 0.0446 0.3725 8.8 3zds-a5-m1-cL_3zds-a5-m13-cK, 3zds-a5-m12-cJ_3zds-a5-m13-cK, 3zds-a5-m13-cI_3zds-a5-m13-cK
9 3zds-a5-m13-cI 426 51 0.2468 0.0446 0.3725 8.8 3zds-a5-m13-cI_3zds-a5-m13-cK
10 3zds-a5-m12-cJ 426 51 0.2468 0.0446 0.3725 8.8 3zds-a5-m12-cJ_3zds-a5-m13-cK
11 3zds-a5-m1-cL 426 51 0.2468 0.0446 0.3725 8.8 3zds-a5-m1-cL_3zds-a5-m13-cK

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Reference:
Jacob Schwartz et al.

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