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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=36)
NFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6n37-a1-m1-cJ 36 36 1.0000 1.0000 1.0000 1.72e-18 6n37-a1-m1-cF_6n37-a1-m1-cJ, 6n37-a1-m1-cH_6n37-a1-m1-cJ
2 6n37-a1-m1-cH 36 36 1.0000 1.0000 1.0000 1.72e-18 6n37-a1-m1-cH_6n37-a1-m1-cJ
3 6n37-a1-m1-cF 36 36 1.0000 1.0000 1.0000 1.72e-18 6n37-a1-m1-cF_6n37-a1-m1-cJ
4 6n3b-a1-m1-cJ 41 36 1.0000 0.8780 1.0000 2.40e-18 6n3b-a1-m1-cB_6n3b-a1-m1-cJ
5 6n3b-a1-m1-cB 41 36 1.0000 0.8780 1.0000 2.40e-18 6n3b-a1-m1-cB_6n3b-a1-m1-cJ
6 7q3u-a1-m1-cC 71 36 1.0000 0.5070 1.0000 2.98e-18 7q3u-a1-m1-cA_7q3u-a1-m1-cC
7 7q3u-a1-m1-cA 71 36 1.0000 0.5070 1.0000 2.98e-18 7q3u-a1-m1-cA_7q3u-a1-m1-cC
8 6n3a-a1-m1-cJ 50 36 1.0000 0.7200 1.0000 3.87e-18 6n3a-a1-m1-cE_6n3a-a1-m1-cJ, 6n3a-a1-m1-cI_6n3a-a1-m1-cJ
9 6n3a-a1-m1-cI 50 36 1.0000 0.7200 1.0000 3.87e-18 6n3a-a1-m1-cI_6n3a-a1-m1-cJ
10 6n3a-a1-m1-cE 50 36 1.0000 0.7200 1.0000 3.87e-18 6n3a-a1-m1-cE_6n3a-a1-m1-cJ
11 7py2-a1-m1-cD 79 36 1.0000 0.4557 1.0000 4.46e-18 7py2-a1-m1-cC_7py2-a1-m1-cD
12 7py2-a1-m1-cC 79 36 1.0000 0.4557 1.0000 4.46e-18 7py2-a1-m1-cC_7py2-a1-m1-cD
13 6n3b-a1-m1-cI 36 35 0.9722 0.9722 1.0000 7.19e-18 6n3b-a1-m1-cA_6n3b-a1-m1-cI
14 6n3b-a1-m1-cA 36 35 0.9722 0.9722 1.0000 7.19e-18 6n3b-a1-m1-cA_6n3b-a1-m1-cI
15 7kwz-a1-m1-cE 139 36 1.0000 0.2590 1.0000 1.37e-17 7kwz-a1-m1-cD_7kwz-a1-m1-cE
16 7kwz-a1-m1-cD 139 36 1.0000 0.2590 1.0000 1.37e-17 7kwz-a1-m1-cD_7kwz-a1-m1-cE
17 7zsk-a1-m1-cC 1476 27 0.3056 0.0075 0.4074 2.1 7zsk-a1-m1-cB_7zsk-a1-m1-cC, 7zsk-a1-m1-cC_7zsk-a1-m1-cA, 7zsk-a1-m1-cC_7zsk-a1-m1-cD
18 7zsk-a1-m1-cB 1476 27 0.3056 0.0075 0.4074 2.1 7zsk-a1-m1-cB_7zsk-a1-m1-cA, 7zsk-a1-m1-cB_7zsk-a1-m1-cC
19 3fi7-a2-m4-cA 177 20 0.2778 0.0565 0.5000 5.7 3fi7-a2-m1-cA_3fi7-a2-m4-cA, 3fi7-a2-m3-cA_3fi7-a2-m4-cA
20 3fi7-a2-m3-cA 177 20 0.2778 0.0565 0.5000 5.7 3fi7-a2-m3-cA_3fi7-a2-m4-cA
21 3fi7-a2-m1-cA 177 20 0.2778 0.0565 0.5000 5.7 3fi7-a2-m1-cA_3fi7-a2-m4-cA
22 6ket-a1-m1-cB 332 16 0.2778 0.0301 0.6250 6.1 6ket-a1-m1-cB_6ket-a1-m1-cA
23 6ket-a1-m1-cA 348 16 0.2778 0.0287 0.6250 6.1 6ket-a1-m1-cB_6ket-a1-m1-cA
24 2pff-a1-m2-cH 2006 22 0.3056 0.0055 0.5000 7.7 2pff-a1-m2-cE_2pff-a1-m2-cH
25 2pff-a1-m2-cE 2006 22 0.3056 0.0055 0.5000 7.7 2pff-a1-m2-cE_2pff-a1-m2-cH
26 6n3a-a1-m1-cT 10 10 0.2778 1.0000 1.0000 9.7 6n3a-a1-m1-cO_6n3a-a1-m1-cT
27 6n3a-a1-m1-cO 10 10 0.2778 1.0000 1.0000 9.7 6n3a-a1-m1-cO_6n3a-a1-m1-cT

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Reference:
Jacob Schwartz et al.

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