Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=84)
NGLPSETYITCAEANEMAKTDSAQVAEIVAVMGNASVASRDLKIEQSPELSAKVVEKLNQ
VCAKDPQMLLITAIDDTMRAIGKK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2lrm-a1-m1-cB 84 84 1.0000 1.0000 1.0000 5.05e-57 2lrm-a1-m1-cA_2lrm-a1-m1-cB
2 2lrm-a1-m1-cA 84 84 1.0000 1.0000 1.0000 5.05e-57 2lrm-a1-m1-cA_2lrm-a1-m1-cB
3 2o95-a4-m3-cB 176 28 0.1310 0.0625 0.3929 1.5 2o95-a4-m1-cB_2o95-a4-m3-cB
4 2o95-a4-m1-cB 176 28 0.1310 0.0625 0.3929 1.5 2o95-a4-m1-cB_2o95-a4-m3-cB
5 2o95-a3-m1-cB 176 28 0.1310 0.0625 0.3929 1.5 2o95-a3-m1-cB_2o95-a3-m1-cA
6 2o95-a3-m1-cA 179 28 0.1310 0.0615 0.3929 1.5 2o95-a3-m1-cB_2o95-a3-m1-cA
7 4df0-a1-m1-cB 199 30 0.1667 0.0704 0.4667 4.4 4df0-a1-m1-cA_4df0-a1-m1-cB
8 4df0-a1-m1-cA 199 30 0.1667 0.0704 0.4667 4.4 4df0-a1-m1-cA_4df0-a1-m1-cB
9 1jro-a2-m1-cH 760 54 0.2024 0.0224 0.3148 6.0 1jro-a2-m1-cF_1jro-a2-m1-cH
10 1jro-a2-m1-cF 760 54 0.2024 0.0224 0.3148 6.0 1jro-a2-m1-cF_1jro-a2-m1-cH
11 1f1m-a2-m1-cD 162 36 0.1786 0.0926 0.4167 7.4 1f1m-a2-m1-cC_1f1m-a2-m1-cD
12 1f1m-a2-m1-cC 162 36 0.1786 0.0926 0.4167 7.4 1f1m-a2-m1-cC_1f1m-a2-m1-cD
13 2q32-a1-m1-cB 218 33 0.1071 0.0413 0.2727 7.8 2q32-a1-m1-cA_2q32-a1-m1-cB
14 2q32-a1-m1-cA 213 33 0.1071 0.0423 0.2727 8.0 2q32-a1-m1-cA_2q32-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600