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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=51)
NHFTFGDDLLGVNSEIARKLRQFYLEIQEEALPARLLELLERLEQAERFGL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4qic-a1-m1-cD 54 51 1.0000 0.9444 1.0000 1.49e-30 4qic-a1-m1-cB_4qic-a1-m1-cD
2 4qic-a1-m1-cB 51 51 1.0000 1.0000 1.0000 1.49e-30 4qic-a1-m1-cB_4qic-a1-m1-cD
3 5ykr-a1-m1-cB 452 48 0.2941 0.0332 0.3125 3.5 5ykr-a1-m1-cA_5ykr-a1-m1-cB
4 5ykr-a1-m1-cA 452 48 0.2941 0.0332 0.3125 3.5 5ykr-a1-m1-cA_5ykr-a1-m1-cB
5 8gps-a1-m2-cA 228 36 0.2353 0.0526 0.3333 4.3 8gps-a1-m1-cA_8gps-a1-m2-cA
6 8gps-a1-m1-cA 228 36 0.2353 0.0526 0.3333 4.3 8gps-a1-m1-cA_8gps-a1-m2-cA
7 6kw5-a1-m1-cH 393 40 0.2941 0.0382 0.3750 5.9 6kw5-a1-m1-cD_6kw5-a1-m1-cH
8 1d7f-a1-m1-cB 686 21 0.2353 0.0175 0.5714 6.4 1d7f-a1-m1-cA_1d7f-a1-m1-cB
9 1d7f-a1-m1-cA 686 21 0.2353 0.0175 0.5714 6.4 1d7f-a1-m1-cA_1d7f-a1-m1-cB
10 5cos-a1-m1-cD 61 36 0.2157 0.1803 0.3056 8.1 5cos-a1-m1-cC_5cos-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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