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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
NHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYL
TSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5gjk-a1-m2-cA 94 94 1.0000 1.0000 1.0000 3.72e-69 5gjk-a1-m1-cA_5gjk-a1-m2-cA
2 5gjk-a1-m1-cA 94 94 1.0000 1.0000 1.0000 3.72e-69 5gjk-a1-m1-cA_5gjk-a1-m2-cA
3 6kw5-a1-m1-cD 305 92 0.5745 0.1770 0.5870 4.64e-38 6kw5-a1-m1-cD_6kw5-a1-m1-cH
4 7egp-a1-m1-cE 422 94 0.5638 0.1256 0.5638 5.61e-38 7egp-a1-m1-cD_7egp-a1-m1-cE
5 7egp-a1-m1-cD 395 94 0.5638 0.1342 0.5638 7.40e-38 7egp-a1-m1-cD_7egp-a1-m1-cE
6 6kw5-a1-m1-cH 393 92 0.5745 0.1374 0.5870 1.60e-36 6kw5-a1-m1-cD_6kw5-a1-m1-cH
7 5it3-a1-m2-cA 85 77 0.2340 0.2588 0.2857 8.47e-05 5it3-a1-m1-cA_5it3-a1-m2-cA
8 5it3-a1-m1-cA 85 77 0.2340 0.2588 0.2857 8.47e-05 5it3-a1-m1-cA_5it3-a1-m2-cA
9 4xbf-a1-m4-cA 666 77 0.2447 0.0345 0.2987 2.39e-04 4xbf-a1-m2-cA_4xbf-a1-m4-cA, 4xbf-a1-m3-cA_4xbf-a1-m4-cA
10 4xbf-a1-m3-cA 666 77 0.2447 0.0345 0.2987 2.39e-04 4xbf-a1-m3-cA_4xbf-a1-m4-cA
11 4xbf-a1-m2-cA 666 77 0.2447 0.0345 0.2987 2.39e-04 4xbf-a1-m2-cA_4xbf-a1-m4-cA
12 4fwj-a3-m1-cB 742 76 0.2553 0.0323 0.3158 0.025 4fwj-a3-m1-cB_4fwj-a3-m1-cA
13 4gu1-a3-m1-cB 746 76 0.2553 0.0322 0.3158 0.026 4gu1-a3-m1-cA_4gu1-a3-m1-cB
14 4gu1-a3-m1-cA 746 76 0.2553 0.0322 0.3158 0.026 4gu1-a3-m1-cA_4gu1-a3-m1-cB
15 4gu0-a2-m1-cB 748 76 0.2553 0.0321 0.3158 0.027 4gu0-a2-m1-cD_4gu0-a2-m1-cB
16 4gu0-a2-m1-cD 735 76 0.2553 0.0327 0.3158 0.027 4gu0-a2-m1-cD_4gu0-a2-m1-cB
17 4fwj-a3-m1-cA 750 76 0.2553 0.0320 0.3158 0.029 4fwj-a3-m1-cB_4fwj-a3-m1-cA
18 1s2t-a1-m2-cB 291 30 0.1489 0.0481 0.4667 0.73 1s2t-a1-m1-cA_1s2t-a1-m2-cB, 1s2t-a1-m1-cB_1s2t-a1-m2-cB, 1s2t-a1-m2-cA_1s2t-a1-m2-cB
19 1s2t-a1-m2-cA 291 30 0.1489 0.0481 0.4667 0.73 1s2t-a1-m2-cA_1s2t-a1-m2-cB
20 1s2t-a1-m1-cB 291 30 0.1489 0.0481 0.4667 0.73 1s2t-a1-m1-cB_1s2t-a1-m2-cB
21 1s2t-a1-m1-cA 291 30 0.1489 0.0481 0.4667 0.73 1s2t-a1-m1-cA_1s2t-a1-m2-cB
22 1mzv-a1-m2-cA 216 31 0.1064 0.0463 0.3226 2.3 1mzv-a1-m1-cA_1mzv-a1-m2-cA
23 1mzv-a1-m1-cA 216 31 0.1064 0.0463 0.3226 2.3 1mzv-a1-m1-cA_1mzv-a1-m2-cA
24 5vn4-a1-m1-cA 237 54 0.1596 0.0633 0.2778 2.4 5vn4-a1-m1-cB_5vn4-a1-m1-cA
25 5vn4-a1-m1-cB 231 54 0.1596 0.0649 0.2778 2.6 5vn4-a1-m1-cB_5vn4-a1-m1-cA
26 1qcc-a1-m2-cA 236 35 0.1170 0.0466 0.3143 3.1 1qcc-a1-m1-cA_1qcc-a1-m2-cA
27 1qcc-a1-m1-cA 236 35 0.1170 0.0466 0.3143 3.1 1qcc-a1-m1-cA_1qcc-a1-m2-cA
28 2q8n-a1-m2-cA 449 43 0.1596 0.0334 0.3488 6.0 2q8n-a1-m2-cA_2q8n-a1-m2-cC
29 2q8n-a1-m2-cC 450 43 0.1596 0.0333 0.3488 6.0 2q8n-a1-m1-cB_2q8n-a1-m2-cC, 2q8n-a1-m1-cC_2q8n-a1-m2-cC, 2q8n-a1-m2-cA_2q8n-a1-m2-cC, 2q8n-a1-m2-cB_2q8n-a1-m2-cC
30 2q8n-a1-m2-cB 450 43 0.1596 0.0333 0.3488 6.0 2q8n-a1-m2-cB_2q8n-a1-m2-cC
31 2q8n-a1-m1-cC 450 43 0.1596 0.0333 0.3488 6.0 2q8n-a1-m1-cC_2q8n-a1-m2-cC
32 2q8n-a1-m1-cB 450 43 0.1596 0.0333 0.3488 6.0 2q8n-a1-m1-cB_2q8n-a1-m2-cC
33 7tzb-a1-m1-cA 463 68 0.2128 0.0432 0.2941 9.3 7tzb-a1-m1-cB_7tzb-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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