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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
NHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAIAYINELKSKVVKTESEKLQI
KNQLEEVKLELAGR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5gnj-a2-m1-cA 74 74 1.0000 1.0000 1.0000 2.99e-48 5gnj-a2-m1-cA_5gnj-a2-m1-cB
2 5gnj-a2-m1-cB 77 74 1.0000 0.9610 1.0000 4.73e-48 5gnj-a2-m1-cA_5gnj-a2-m1-cB
3 1r05-a1-m1-cB 87 65 0.2703 0.2299 0.3077 0.001 1r05-a1-m1-cA_1r05-a1-m1-cB
4 1r05-a1-m1-cA 87 65 0.2703 0.2299 0.3077 0.001 1r05-a1-m1-cA_1r05-a1-m1-cB
5 1an4-a1-m1-cB 65 52 0.2432 0.2769 0.3462 0.002 1an4-a1-m1-cA_1an4-a1-m1-cB
6 1an4-a1-m1-cA 65 52 0.2432 0.2769 0.3462 0.002 1an4-a1-m1-cA_1an4-a1-m1-cB
7 7ssa-a1-m1-cL 67 47 0.2568 0.2836 0.4043 0.003 7ssa-a1-m1-cK_7ssa-a1-m1-cL
8 7ssa-a1-m1-cK 67 47 0.2568 0.2836 0.4043 0.003 7ssa-a1-m1-cK_7ssa-a1-m1-cL
9 5eyo-a2-m2-cC 88 51 0.2297 0.1932 0.3333 0.007 5eyo-a2-m1-cC_5eyo-a2-m2-cC
10 5eyo-a2-m1-cC 88 51 0.2297 0.1932 0.3333 0.007 5eyo-a2-m1-cC_5eyo-a2-m2-cC
11 5i4z-a1-m1-cB 74 66 0.3108 0.3108 0.3485 0.031 5i4z-a1-m1-cA_5i4z-a1-m1-cB
12 5i4z-a1-m1-cA 74 66 0.3108 0.3108 0.3485 0.031 5i4z-a1-m1-cA_5i4z-a1-m1-cB
13 4s2r-a1-m1-cQ 612 52 0.2162 0.0261 0.3077 0.058 4s2r-a1-m1-cQ_4s2r-a1-m1-cP
14 4s2r-a1-m1-cP 615 52 0.2162 0.0260 0.3077 0.058 4s2r-a1-m1-cQ_4s2r-a1-m1-cP
15 7d8s-a2-m1-cC 184 47 0.2027 0.0815 0.3191 0.27 7d8s-a2-m1-cD_7d8s-a2-m1-cC
16 7d8t-a1-m1-cB 199 51 0.2162 0.0804 0.3137 0.51 7d8t-a1-m1-cA_7d8t-a1-m1-cB
17 7d8t-a1-m1-cA 199 51 0.2162 0.0804 0.3137 0.51 7d8t-a1-m1-cA_7d8t-a1-m1-cB
18 4eot-a1-m1-cB 92 19 0.1351 0.1087 0.5263 7.4 4eot-a1-m1-cA_4eot-a1-m1-cB
19 4eot-a1-m1-cA 92 19 0.1351 0.1087 0.5263 7.4 4eot-a1-m1-cA_4eot-a1-m1-cB
20 7eod-a2-m1-cC 66 35 0.1216 0.1364 0.2571 7.5 7eod-a2-m1-cC_7eod-a2-m1-cD

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Reference:
Jacob Schwartz et al.

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