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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=76)
NIDEIERKIDEAIEKEDYETLLSLLNKRKELEGLPKDKLSEILEKDRKRLEIIEKRKTAL
FQEINVIREARSSLQK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2fzt-a1-m1-cB 77 76 1.0000 0.9870 1.0000 9.07e-46 2fzt-a1-m1-cA_2fzt-a1-m1-cB
2 2fzt-a1-m1-cA 76 76 1.0000 1.0000 1.0000 9.41e-46 2fzt-a1-m1-cA_2fzt-a1-m1-cB
3 3e7j-a1-m1-cB 743 42 0.2105 0.0215 0.3810 0.84 3e7j-a1-m1-cA_3e7j-a1-m1-cB
4 3e7j-a1-m1-cA 743 42 0.2105 0.0215 0.3810 0.84 3e7j-a1-m1-cA_3e7j-a1-m1-cB
5 5tg9-a2-m5-cD 168 37 0.1974 0.0893 0.4054 2.0 5tg9-a2-m3-cD_5tg9-a2-m5-cD
6 5tg9-a2-m3-cD 168 37 0.1974 0.0893 0.4054 2.0 5tg9-a2-m3-cD_5tg9-a2-m5-cD
7 2wuj-a1-m1-cB 50 37 0.1711 0.2600 0.3514 2.5 2wuj-a1-m1-cA_2wuj-a1-m1-cB
8 2wuj-a1-m1-cA 50 37 0.1711 0.2600 0.3514 2.5 2wuj-a1-m1-cA_2wuj-a1-m1-cB
9 3tpf-a1-m1-cA 290 63 0.3026 0.0793 0.3651 7.4 3tpf-a1-m1-cA_3tpf-a1-m1-cB
10 3tpf-a1-m1-cB 292 63 0.3026 0.0788 0.3651 7.4 3tpf-a1-m1-cA_3tpf-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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