HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=85)
NIIFVGKKPTMNYVLAVVTQFNNNANKIIIKARGKTISKAVDVAEITRHKFIPDAKYEEI
RLDTETLQGERGSSNVSSIEITLSR

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	4z9e-a2-m1-cD	85	85	1.0000	1.0000	1.0000	8.96e-58	4z9e-a2-m1-cC_4z9e-a2-m1-cD
2	4z9e-a2-m1-cC	85	85	1.0000	1.0000	1.0000	8.96e-58	4z9e-a2-m1-cC_4z9e-a2-m1-cD
3	1nfj-a1-m4-cA	87	86	0.5647	0.5517	0.5581	9.62e-32	1nfj-a1-m1-cA_1nfj-a1-m4-cA
4	1nfj-a1-m3-cA	87	86	0.5647	0.5517	0.5581	9.62e-32	1nfj-a1-m1-cA_1nfj-a1-m3-cA
5	1nfj-a1-m1-cA	87	86	0.5647	0.5517	0.5581	9.62e-32	1nfj-a1-m1-cA_1nfj-a1-m3-cA, 1nfj-a1-m1-cA_1nfj-a1-m4-cA
6	1nfh-a1-m2-cB	86	86	0.5647	0.5581	0.5581	9.77e-32	1nfh-a1-m1-cA_1nfh-a1-m2-cB
7	1nfh-a1-m1-cA	86	86	0.5647	0.5581	0.5581	9.77e-32	1nfh-a1-m1-cA_1nfh-a1-m2-cB
8	3toe-a1-m1-cB	86	86	0.5529	0.5465	0.5465	1.92e-28	3toe-a1-m1-cA_3toe-a1-m1-cB
9	3toe-a1-m1-cA	86	86	0.5529	0.5465	0.5465	1.92e-28	3toe-a1-m1-cA_3toe-a1-m1-cB
10	2z7c-a2-m1-cC	89	87	0.5294	0.5056	0.5172	1.01e-25	2z7c-a2-m1-cC_2z7c-a2-m1-cD
11	2z7c-a2-m1-cD	92	87	0.5294	0.4891	0.5172	1.14e-25	2z7c-a2-m1-cC_2z7c-a2-m1-cD
12	2bky-a1-m1-cB	89	87	0.4824	0.4607	0.4713	1.44e-23	2bky-a1-m1-cA_2bky-a1-m1-cB
13	2bky-a1-m1-cA	89	87	0.4824	0.4607	0.4713	1.44e-23	2bky-a1-m1-cA_2bky-a1-m1-cB
14	1h0x-a1-m1-cB	89	87	0.4824	0.4607	0.4713	1.44e-23	1h0x-a1-m1-cA_1h0x-a1-m1-cB
15	1h0x-a1-m1-cA	89	87	0.4824	0.4607	0.4713	1.44e-23	1h0x-a1-m1-cA_1h0x-a1-m1-cB
16	3wbm-a1-m1-cC	86	86	0.4706	0.4651	0.4651	5.84e-22	3wbm-a1-m1-cA_3wbm-a1-m1-cC
17	3wbm-a1-m1-cA	86	86	0.4706	0.4651	0.4651	5.84e-22	3wbm-a1-m1-cA_3wbm-a1-m1-cC
18	3u6y-a1-m1-cC	99	89	0.4000	0.3434	0.3820	2.56e-17	3u6y-a1-m1-cA_3u6y-a1-m1-cC
19	3u6y-a1-m1-cA	99	89	0.4000	0.3434	0.3820	2.56e-17	3u6y-a1-m1-cA_3u6y-a1-m1-cC
20	1udv-a1-m1-cA	88	36	0.1882	0.1818	0.4444	0.001	1udv-a1-m1-cB_1udv-a1-m1-cA
21	2bky-a1-m1-cY	86	36	0.1882	0.1860	0.4444	0.001	2bky-a1-m1-cX_2bky-a1-m1-cY
22	2bky-a1-m1-cX	86	36	0.1882	0.1860	0.4444	0.001	2bky-a1-m1-cX_2bky-a1-m1-cY
23	1udv-a1-m1-cB	86	36	0.1882	0.1860	0.4444	0.001	1udv-a1-m1-cB_1udv-a1-m1-cA
24	6leb-a1-m1-cB	315	29	0.1294	0.0349	0.3793	5.2	6leb-a1-m1-cA_6leb-a1-m1-cB
25	6leb-a1-m1-cA	315	29	0.1294	0.0349	0.3793	5.2	6leb-a1-m1-cA_6leb-a1-m1-cB
26	1ega-a1-m1-cA	292	59	0.2000	0.0582	0.2881	7.1	1ega-a1-m1-cA_1ega-a1-m1-cB
27	1ega-a1-m1-cB	293	59	0.2000	0.0580	0.2881	7.1	1ega-a1-m1-cA_1ega-a1-m1-cB
28	7q4a-a1-m1-cB	345	30	0.1059	0.0261	0.3000	7.9	7q4a-a1-m1-cA_7q4a-a1-m1-cB
29	7q4a-a1-m1-cA	334	30	0.1059	0.0269	0.3000	8.6	7q4a-a1-m1-cA_7q4a-a1-m1-cB

[Back]

Reference:
Jacob Schwartz et al.