Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
NIITVTLNMEKYFLGISIVGQSNERGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMN
FENMSNDDAVRVLRDIVHKPIVLTVAKSGEIVLWSDIP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3cc0-a1-m1-cC 98 98 1.0000 1.0000 1.0000 2.68e-67 3cc0-a1-m1-cC_3cc0-a1-m1-cA, 3cc0-a1-m1-cC_3cc0-a1-m1-cB
2 3cc0-a1-m1-cB 103 100 0.9898 0.9417 0.9700 1.84e-62 3cc0-a1-m1-cC_3cc0-a1-m1-cB
3 3cc0-a1-m1-cA 106 104 1.0000 0.9245 0.9423 7.16e-61 3cc0-a1-m1-cC_3cc0-a1-m1-cA
4 3cbx-a1-m1-cA 105 97 0.9184 0.8571 0.9278 1.40e-55 3cbx-a1-m1-cB_3cbx-a1-m1-cA
5 3cby-a1-m1-cB 98 99 0.8878 0.8878 0.8788 5.52e-50 3cby-a1-m1-cB_3cby-a1-m1-cA
6 3cbx-a1-m1-cB 99 97 0.8673 0.8586 0.8763 5.40e-49 3cbx-a1-m1-cB_3cbx-a1-m1-cA
7 3cby-a1-m1-cA 101 92 0.8469 0.8218 0.9022 7.15e-48 3cby-a1-m1-cB_3cby-a1-m1-cA
8 2rey-a1-m2-cA 91 92 0.8265 0.8901 0.8804 8.19e-48 2rey-a1-m1-cA_2rey-a1-m2-cA
9 2rey-a1-m1-cA 91 92 0.8265 0.8901 0.8804 8.19e-48 2rey-a1-m1-cA_2rey-a1-m2-cA
10 2f0a-a5-m1-cA 87 88 0.7959 0.8966 0.8864 1.03e-42 2f0a-a5-m1-cC_2f0a-a5-m1-cA
11 1l6o-a1-m1-cC 87 88 0.7959 0.8966 0.8864 1.03e-42 1l6o-a1-m1-cC_1l6o-a1-m1-cA
12 1l6o-a1-m1-cA 90 88 0.7959 0.8667 0.8864 1.06e-42 1l6o-a1-m1-cB_1l6o-a1-m1-cA, 1l6o-a1-m1-cC_1l6o-a1-m1-cA
13 1l6o-a1-m1-cB 88 88 0.7959 0.8864 0.8864 1.10e-42 1l6o-a1-m1-cB_1l6o-a1-m1-cA
14 3fy5-a2-m2-cB 80 87 0.7347 0.9000 0.8276 3.43e-36 3fy5-a2-m1-cB_3fy5-a2-m2-cB
15 3fy5-a2-m1-cB 80 87 0.7347 0.9000 0.8276 3.43e-36 3fy5-a2-m1-cB_3fy5-a2-m2-cB
16 2f0a-a5-m1-cC 80 88 0.7449 0.9125 0.8295 3.47e-36 2f0a-a5-m1-cC_2f0a-a5-m1-cA
17 4amh-a1-m1-cB 92 79 0.3163 0.3370 0.3924 2.44e-10 4amh-a1-m1-cB_4amh-a1-m1-cA
18 4amh-a1-m1-cA 94 79 0.3163 0.3298 0.3924 3.35e-10 4amh-a1-m1-cB_4amh-a1-m1-cA
19 7qcr-a1-m1-cB 86 91 0.3469 0.3953 0.3736 3.90e-10 7qcr-a1-m1-cB_7qcr-a1-m1-cA
20 7qcr-a1-m1-cA 87 91 0.3469 0.3908 0.3736 4.50e-10 7qcr-a1-m1-cB_7qcr-a1-m1-cA
21 2xkx-a1-m1-cB 718 77 0.3163 0.0432 0.4026 5.03e-10 2xkx-a1-m1-cB_2xkx-a1-m1-cA
22 2xkx-a1-m1-cB 718 74 0.2551 0.0348 0.3378 8.03e-06 2xkx-a1-m1-cB_2xkx-a1-m1-cA
23 2xkx-a1-m1-cB 718 62 0.2347 0.0320 0.3710 6.92e-05 2xkx-a1-m1-cB_2xkx-a1-m1-cA
24 2xkx-a1-m1-cA 721 77 0.3163 0.0430 0.4026 5.03e-10 2xkx-a1-m1-cB_2xkx-a1-m1-cA
25 2xkx-a1-m1-cA 721 74 0.2551 0.0347 0.3378 8.04e-06 2xkx-a1-m1-cB_2xkx-a1-m1-cA
26 2xkx-a1-m1-cA 721 62 0.2347 0.0319 0.3710 6.86e-05 2xkx-a1-m1-cB_2xkx-a1-m1-cA
27 6nek-a1-m2-cA 86 85 0.3061 0.3488 0.3529 5.11e-10 6nek-a1-m1-cA_6nek-a1-m2-cA
28 6nek-a1-m1-cA 86 85 0.3061 0.3488 0.3529 5.11e-10 6nek-a1-m1-cA_6nek-a1-m2-cA
29 3axa-a2-m3-cB 97 92 0.3571 0.3608 0.3804 6.76e-10 3axa-a2-m1-cB_3axa-a2-m3-cB
30 3axa-a2-m1-cB 97 92 0.3571 0.3608 0.3804 6.76e-10 3axa-a2-m1-cB_3axa-a2-m3-cB
31 2x7z-a1-m2-cA 99 65 0.2653 0.2626 0.4000 1.04e-09 2x7z-a1-m1-cA_2x7z-a1-m2-cA
32 2x7z-a1-m1-cA 99 65 0.2653 0.2626 0.4000 1.04e-09 2x7z-a1-m1-cA_2x7z-a1-m2-cA
33 3rl8-a1-m1-cD 94 65 0.2653 0.2766 0.4000 1.08e-09 3rl8-a1-m1-cD_3rl8-a1-m1-cC, 3rl8-a1-m1-cE_3rl8-a1-m1-cD
34 3rl8-a1-m1-cA 94 65 0.2653 0.2766 0.4000 1.08e-09 3rl8-a1-m1-cA_3rl8-a1-m1-cC, 3rl8-a1-m1-cB_3rl8-a1-m1-cA
35 3rl8-a1-m1-cC 95 65 0.2653 0.2737 0.4000 1.13e-09 3rl8-a1-m1-cA_3rl8-a1-m1-cC, 3rl8-a1-m1-cB_3rl8-a1-m1-cC, 3rl8-a1-m1-cD_3rl8-a1-m1-cC
36 3rl8-a1-m1-cE 90 65 0.2653 0.2889 0.4000 1.19e-09 3rl8-a1-m1-cE_3rl8-a1-m1-cD
37 3rl8-a1-m1-cB 90 65 0.2653 0.2889 0.4000 1.19e-09 3rl8-a1-m1-cB_3rl8-a1-m1-cA, 3rl8-a1-m1-cB_3rl8-a1-m1-cC
38 3lny-a1-m6-cA 94 82 0.3163 0.3298 0.3780 1.26e-09 3lny-a1-m3-cA_3lny-a1-m6-cA, 3lny-a1-m5-cA_3lny-a1-m6-cA
39 3lny-a1-m5-cA 94 82 0.3163 0.3298 0.3780 1.26e-09 3lny-a1-m5-cA_3lny-a1-m6-cA
40 3lny-a1-m3-cA 94 82 0.3163 0.3298 0.3780 1.26e-09 3lny-a1-m3-cA_3lny-a1-m6-cA
41 5glj-a1-m1-cB 93 66 0.2653 0.2796 0.3939 2.49e-09 5glj-a1-m1-cB_5glj-a1-m1-cA, 5glj-a1-m1-cB_5glj-a1-m1-cD
42 5glj-a1-m1-cD 96 66 0.2653 0.2708 0.3939 2.86e-09 5glj-a1-m1-cA_5glj-a1-m1-cD, 5glj-a1-m1-cB_5glj-a1-m1-cD
43 5glj-a1-m1-cA 96 66 0.2653 0.2708 0.3939 2.86e-09 5glj-a1-m1-cA_5glj-a1-m1-cD, 5glj-a1-m1-cB_5glj-a1-m1-cA
44 3zrt-a1-m1-cC 188 77 0.3163 0.1649 0.4026 4.63e-09 3zrt-a1-m1-cC_3zrt-a1-m1-cA
45 3zrt-a1-m1-cC 188 74 0.2551 0.1330 0.3378 3.78e-05 3zrt-a1-m1-cC_3zrt-a1-m1-cA
46 3zrt-a1-m1-cA 197 77 0.3163 0.1574 0.4026 4.72e-09 3zrt-a1-m1-cC_3zrt-a1-m1-cA
47 3zrt-a1-m1-cA 197 74 0.2551 0.1269 0.3378 3.14e-05 3zrt-a1-m1-cC_3zrt-a1-m1-cA
48 2fne-a4-m1-cB 100 72 0.2551 0.2500 0.3472 2.00e-08 2fne-a4-m1-cB_2fne-a4-m2-cC
49 2fne-a4-m2-cC 104 72 0.2551 0.2404 0.3472 2.90e-08 2fne-a4-m1-cB_2fne-a4-m2-cC
50 4h11-a3-m2-cA 102 74 0.2755 0.2647 0.3649 6.16e-08 4h11-a3-m1-cB_4h11-a3-m2-cA
51 4h11-a3-m1-cB 102 74 0.2755 0.2647 0.3649 6.16e-08 4h11-a3-m1-cB_4h11-a3-m2-cA
52 2wl7-a1-m3-cA 96 74 0.2755 0.2812 0.3649 6.83e-08 2wl7-a1-m2-cA_2wl7-a1-m3-cA
53 2wl7-a1-m2-cA 96 74 0.2755 0.2812 0.3649 6.83e-08 2wl7-a1-m2-cA_2wl7-a1-m3-cA
54 7mfw-a2-m2-cB 98 93 0.3469 0.3469 0.3656 9.70e-08 7mfw-a2-m1-cA_7mfw-a2-m2-cB
55 7mfw-a1-m1-cB 98 93 0.3469 0.3469 0.3656 9.70e-08 7mfw-a1-m1-cA_7mfw-a1-m1-cB
56 3b76-a1-m1-cA 101 62 0.2347 0.2277 0.3710 5.46e-07 3b76-a1-m1-cA_3b76-a1-m1-cB
57 3b76-a1-m1-cB 102 62 0.2347 0.2255 0.3710 6.47e-07 3b76-a1-m1-cA_3b76-a1-m1-cB
58 4q2n-a3-m1-cF 98 72 0.2755 0.2755 0.3750 1.63e-06 4q2n-a3-m1-cE_4q2n-a3-m1-cF
59 7mfw-a2-m1-cA 93 89 0.3265 0.3441 0.3596 2.91e-06 7mfw-a2-m1-cA_7mfw-a2-m2-cB
60 7mfw-a1-m1-cA 93 89 0.3265 0.3441 0.3596 2.91e-06 7mfw-a1-m1-cA_7mfw-a1-m1-cB
61 4q2n-a3-m1-cE 97 72 0.2755 0.2784 0.3750 3.38e-06 4q2n-a3-m1-cE_4q2n-a3-m1-cF
62 2i1n-a4-m3-cA 101 65 0.2449 0.2376 0.3692 1.61e-05 2i1n-a4-m3-cA_2i1n-a4-m3-cB
63 2i1n-a4-m1-cA 101 65 0.2449 0.2376 0.3692 1.61e-05 2i1n-a4-m1-cA_2i1n-a4-m3-cB
64 2i1n-a3-m1-cA 101 65 0.2449 0.2376 0.3692 1.61e-05 2i1n-a3-m1-cA_2i1n-a3-m2-cB
65 2i1n-a4-m3-cB 102 65 0.2449 0.2353 0.3692 1.66e-05 2i1n-a4-m1-cA_2i1n-a4-m3-cB, 2i1n-a4-m1-cB_2i1n-a4-m3-cB, 2i1n-a4-m3-cA_2i1n-a4-m3-cB
66 2i1n-a4-m1-cB 102 65 0.2449 0.2353 0.3692 1.66e-05 2i1n-a4-m1-cB_2i1n-a4-m3-cB
67 2i1n-a3-m2-cB 102 65 0.2449 0.2353 0.3692 1.66e-05 2i1n-a3-m1-cA_2i1n-a3-m2-cB
68 7qrt-a1-m1-cA 92 73 0.2347 0.2500 0.3151 3.53e-05 7qrt-a1-m1-cB_7qrt-a1-m1-cA
69 7qrt-a1-m1-cB 91 73 0.2347 0.2527 0.3151 3.61e-05 7qrt-a1-m1-cB_7qrt-a1-m1-cA
70 2iwq-a1-m2-cA 92 72 0.2347 0.2500 0.3194 6.39e-05 2iwq-a1-m1-cA_2iwq-a1-m2-cA
71 2iwq-a1-m1-cA 92 72 0.2347 0.2500 0.3194 6.39e-05 2iwq-a1-m1-cA_2iwq-a1-m2-cA
72 4q2q-a1-m2-cA 90 68 0.2245 0.2444 0.3235 7.62e-05 4q2q-a1-m1-cA_4q2q-a1-m2-cA
73 4q2q-a1-m1-cA 90 68 0.2245 0.2444 0.3235 7.62e-05 4q2q-a1-m1-cA_4q2q-a1-m2-cA
74 5jxb-a1-m1-cA 117 62 0.2347 0.1966 0.3710 2.26e-04 5jxb-a1-m1-cA_5jxb-a1-m1-cC
75 5jxb-a1-m1-cC 119 62 0.2347 0.1933 0.3710 2.40e-04 5jxb-a1-m1-cA_5jxb-a1-m1-cC
76 5vwi-a1-m1-cB 87 60 0.2041 0.2299 0.3333 2.75e-04 5vwi-a1-m1-cB_5vwi-a1-m1-cA
77 8ah6-a1-m1-cA 101 62 0.2347 0.2277 0.3710 3.28e-04 8ah6-a1-m1-cA_8ah6-a1-m1-cB
78 8ah6-a1-m1-cB 102 62 0.2347 0.2255 0.3710 3.33e-04 8ah6-a1-m1-cA_8ah6-a1-m1-cB
79 1tp5-a2-m2-cA 115 62 0.2347 0.2000 0.3710 4.61e-04 1tp5-a2-m1-cA_1tp5-a2-m2-cA
80 1tp5-a2-m1-cA 115 62 0.2347 0.2000 0.3710 4.61e-04 1tp5-a2-m1-cA_1tp5-a2-m2-cA
81 3tsw-a5-m1-cD 199 50 0.1735 0.0854 0.3400 0.001 3tsw-a5-m1-cB_3tsw-a5-m1-cD
82 3tsw-a5-m1-cB 194 50 0.1735 0.0876 0.3400 0.001 3tsw-a5-m1-cB_3tsw-a5-m1-cD
83 2rcz-a1-m1-cA 79 40 0.1633 0.2025 0.4000 0.007 2rcz-a1-m1-cA_2rcz-a1-m1-cB
84 2i04-a1-m1-cB 85 74 0.2041 0.2353 0.2703 0.007 2i04-a1-m1-cA_2i04-a1-m1-cB
85 2i04-a1-m1-cA 85 74 0.2041 0.2353 0.2703 0.007 2i04-a1-m1-cA_2i04-a1-m1-cB
86 3e17-a1-m1-cB 79 44 0.1429 0.1772 0.3182 0.008 3e17-a1-m1-cB_3e17-a1-m1-cA
87 2rcz-a1-m1-cB 81 40 0.1633 0.1975 0.4000 0.008 2rcz-a1-m1-cA_2rcz-a1-m1-cB
88 3e17-a1-m1-cA 80 44 0.1429 0.1750 0.3182 0.008 3e17-a1-m1-cB_3e17-a1-m1-cA
89 1n7f-a1-m1-cB 86 74 0.2347 0.2674 0.3108 0.012 1n7f-a1-m1-cA_1n7f-a1-m1-cB
90 1n7f-a1-m1-cA 86 74 0.2347 0.2674 0.3108 0.012 1n7f-a1-m1-cA_1n7f-a1-m1-cB
91 2iwp-a1-m1-cA 92 71 0.2245 0.2391 0.3099 0.022 2iwp-a1-m1-cA_2iwp-a1-m1-cB
92 6y38-a1-m1-cB 92 62 0.1837 0.1957 0.2903 0.037 6y38-a1-m1-cA_6y38-a1-m1-cB
93 3dj1-a3-m6-cB 110 85 0.2449 0.2182 0.2824 0.037 3dj1-a3-m5-cB_3dj1-a3-m6-cB, 3dj1-a3-m6-cB_3dj1-a3-m1-cA
94 3dj1-a3-m5-cB 110 85 0.2449 0.2182 0.2824 0.037 3dj1-a3-m5-cB_3dj1-a3-m6-cB
95 6y38-a1-m1-cA 91 62 0.1837 0.1978 0.2903 0.044 6y38-a1-m1-cA_6y38-a1-m1-cB
96 3dj1-a3-m1-cA 115 67 0.1837 0.1565 0.2687 0.048 3dj1-a3-m6-cB_3dj1-a3-m1-cA
97 7m4r-a1-m1-cA 360 64 0.1735 0.0472 0.2656 0.076 7m4r-a1-m1-cB_7m4r-a1-m1-cA
98 3qdo-a1-m2-cA 109 55 0.1735 0.1560 0.3091 0.11 3qdo-a1-m1-cA_3qdo-a1-m2-cA
99 3qdo-a1-m1-cA 109 55 0.1735 0.1560 0.3091 0.11 3qdo-a1-m1-cA_3qdo-a1-m2-cA
100 3qe1-a1-m2-cA 102 81 0.2449 0.2353 0.2963 0.12 3qe1-a1-m1-cA_3qe1-a1-m2-cA
101 3qe1-a1-m1-cA 102 81 0.2449 0.2353 0.2963 0.12 3qe1-a1-m1-cA_3qe1-a1-m2-cA
102 2iwp-a1-m1-cB 106 63 0.1939 0.1792 0.3016 0.16 2iwp-a1-m1-cA_2iwp-a1-m1-cB
103 1pdr-a1-m6-cA 96 58 0.2041 0.2083 0.3448 0.40 1pdr-a1-m2-cA_1pdr-a1-m6-cA, 1pdr-a1-m3-cA_1pdr-a1-m6-cA, 1pdr-a1-m5-cA_1pdr-a1-m6-cA
104 1pdr-a1-m5-cA 96 58 0.2041 0.2083 0.3448 0.40 1pdr-a1-m5-cA_1pdr-a1-m6-cA
105 1pdr-a1-m3-cA 96 58 0.2041 0.2083 0.3448 0.40 1pdr-a1-m3-cA_1pdr-a1-m6-cA
106 1pdr-a1-m2-cA 96 58 0.2041 0.2083 0.3448 0.40 1pdr-a1-m2-cA_1pdr-a1-m6-cA
107 1kwa-a5-m2-cB 86 45 0.1122 0.1279 0.2444 0.68 1kwa-a5-m2-cB_1kwa-a5-m1-cA
108 1kwa-a4-m1-cB 86 45 0.1122 0.1279 0.2444 0.68 1kwa-a4-m1-cB_1kwa-a4-m1-cA
109 1kwa-a5-m1-cA 88 45 0.1122 0.1250 0.2444 0.79 1kwa-a5-m2-cB_1kwa-a5-m1-cA
110 1kwa-a4-m1-cA 88 45 0.1122 0.1250 0.2444 0.79 1kwa-a4-m1-cB_1kwa-a4-m1-cA
111 7qcs-a1-m1-cA 97 47 0.1327 0.1340 0.2766 2.0 7qcs-a1-m1-cA_7qcs-a1-m1-cB
112 7qcs-a1-m1-cB 98 47 0.1327 0.1327 0.2766 2.1 7qcs-a1-m1-cA_7qcs-a1-m1-cB
113 3o46-a1-m3-cA 83 45 0.1429 0.1687 0.3111 3.2 3o46-a1-m2-cA_3o46-a1-m3-cA
114 3o46-a1-m2-cA 83 45 0.1429 0.1687 0.3111 3.2 3o46-a1-m2-cA_3o46-a1-m3-cA
115 5tyt-a2-m2-cD 89 58 0.1531 0.1685 0.2586 3.9 5tyt-a2-m1-cC_5tyt-a2-m2-cD
116 5tyt-a2-m1-cC 87 58 0.1531 0.1724 0.2586 4.2 5tyt-a2-m1-cC_5tyt-a2-m2-cD
117 5ocs-a3-m3-cD 371 53 0.1837 0.0485 0.3396 5.0 5ocs-a3-m1-cC_5ocs-a3-m3-cD
118 5ocs-a3-m1-cC 369 53 0.1837 0.0488 0.3396 5.3 5ocs-a3-m1-cC_5ocs-a3-m3-cD
119 6gua-a4-m1-cH 819 37 0.1224 0.0147 0.3243 7.0 6gua-a4-m1-cH_6gua-a4-m1-cG
120 6gua-a4-m1-cG 820 37 0.1224 0.0146 0.3243 7.0 6gua-a4-m1-cH_6gua-a4-m1-cG

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600