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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=39)
NIMYDMISDLNERSEDFEKRIVTLETKLETLIGSIHALP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2pnv-a3-m8-cB 39 39 1.0000 1.0000 1.0000 7.47e-23 2pnv-a3-m7-cB_2pnv-a3-m8-cB
2 2pnv-a3-m7-cB 39 39 1.0000 1.0000 1.0000 7.47e-23 2pnv-a3-m7-cB_2pnv-a3-m8-cB
3 6d42-a2-m7-cB 38 30 0.3077 0.3158 0.4000 0.74 6d42-a2-m3-cB_6d42-a2-m7-cB
4 6d42-a2-m3-cB 38 30 0.3077 0.3158 0.4000 0.74 6d42-a2-m3-cB_6d42-a2-m7-cB
5 4q5n-a1-m1-cA 220 27 0.2564 0.0455 0.3704 1.4 4q5n-a1-m1-cB_4q5n-a1-m1-cA
6 4q5n-a1-m1-cB 218 27 0.2564 0.0459 0.3704 1.5 4q5n-a1-m1-cB_4q5n-a1-m1-cA
7 6bx7-a1-m2-cA 429 33 0.2564 0.0233 0.3030 1.8 6bx7-a1-m1-cA_6bx7-a1-m2-cA
8 6bx7-a1-m1-cA 429 33 0.2564 0.0233 0.3030 1.8 6bx7-a1-m1-cA_6bx7-a1-m2-cA
9 6mga-a2-m3-cA 429 33 0.2564 0.0233 0.3030 1.8 6mga-a2-m1-cA_6mga-a2-m3-cA
10 6mga-a2-m1-cA 429 33 0.2564 0.0233 0.3030 1.8 6mga-a2-m1-cA_6mga-a2-m3-cA
11 5hzp-a1-m1-cC 71 29 0.2564 0.1408 0.3448 5.4 5hzp-a1-m1-cA_5hzp-a1-m1-cC
12 5hzp-a1-m1-cA 71 29 0.2564 0.1408 0.3448 5.4 5hzp-a1-m1-cA_5hzp-a1-m1-cC
13 6ue4-a1-m1-cA 354 26 0.2821 0.0311 0.4231 6.2 6ue4-a1-m1-cB_6ue4-a1-m1-cA
14 6ue4-a1-m1-cB 351 26 0.2821 0.0313 0.4231 6.3 6ue4-a1-m1-cB_6ue4-a1-m1-cA
15 2jgo-a1-m1-cB 29 24 0.2564 0.3448 0.4167 7.7 2jgo-a1-m1-cA_2jgo-a1-m1-cB
16 2jgo-a1-m1-cA 29 24 0.2564 0.3448 0.4167 7.7 2jgo-a1-m1-cA_2jgo-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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