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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=69)
NINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRLENRQKKLEHANRHL
LLRIQELGG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7eod-a2-m1-cD 69 69 1.0000 1.0000 1.0000 2.56e-45 7eod-a2-m1-cC_7eod-a2-m1-cD
2 7d8t-a1-m1-cB 199 71 0.9710 0.3367 0.9437 6.45e-41 7d8t-a1-m1-cA_7d8t-a1-m1-cB
3 7d8t-a1-m1-cA 199 71 0.9710 0.3367 0.9437 6.45e-41 7d8t-a1-m1-cA_7d8t-a1-m1-cB
4 6fx5-a1-m1-cB 74 67 0.8841 0.8243 0.9104 1.94e-39 6fx5-a1-m1-cA_6fx5-a1-m1-cB
5 7eod-a2-m1-cC 66 69 0.9420 0.9848 0.9420 1.98e-39 7eod-a2-m1-cC_7eod-a2-m1-cD
6 6fx5-a1-m1-cA 72 66 0.8696 0.8333 0.9091 1.02e-38 6fx5-a1-m1-cA_6fx5-a1-m1-cB
7 7d8r-a2-m1-cD 174 71 0.9420 0.3736 0.9155 1.01e-37 7d8r-a2-m1-cC_7d8r-a2-m1-cD
8 7d8s-a2-m1-cD 175 71 0.8986 0.3543 0.8732 2.24e-34 7d8s-a2-m1-cD_7d8s-a2-m1-cC
9 7d8s-a2-m1-cC 184 71 0.8841 0.3315 0.8592 6.56e-33 7d8s-a2-m1-cD_7d8s-a2-m1-cC
10 7d8r-a2-m1-cC 168 71 0.8551 0.3512 0.8310 5.57e-31 7d8r-a2-m1-cC_7d8r-a2-m1-cD
11 7y62-a1-m1-cA 74 72 0.7246 0.6757 0.6944 1.75e-29 7y62-a1-m1-cB_7y62-a1-m1-cA
12 7f09-a2-m1-cC 67 71 0.7971 0.8209 0.7746 3.65e-29 7f09-a2-m1-cD_7f09-a2-m1-cC
13 7f09-a2-m1-cD 65 71 0.7681 0.8154 0.7465 1.23e-27 7f09-a2-m1-cD_7f09-a2-m1-cC
14 7y62-a1-m1-cB 69 72 0.6812 0.6812 0.6528 1.27e-24 7y62-a1-m1-cB_7y62-a1-m1-cA
15 1am9-a1-m1-cD 76 47 0.2609 0.2368 0.3830 2.53e-04 1am9-a1-m1-cD_1am9-a1-m1-cC
16 1am9-a1-m1-cC 82 47 0.2609 0.2195 0.3830 2.65e-04 1am9-a1-m1-cD_1am9-a1-m1-cC
17 7f2f-a1-m1-cB 94 75 0.3623 0.2660 0.3333 0.70 7f2f-a1-m1-cA_7f2f-a1-m1-cB
18 1an4-a1-m1-cB 65 46 0.2319 0.2462 0.3478 0.85 1an4-a1-m1-cA_1an4-a1-m1-cB
19 1an4-a1-m1-cA 65 46 0.2319 0.2462 0.3478 0.85 1an4-a1-m1-cA_1an4-a1-m1-cB
20 7f2f-a1-m1-cA 90 48 0.2464 0.1889 0.3542 1.5 7f2f-a1-m1-cA_7f2f-a1-m1-cB
21 7eap-a1-m2-cA 755 41 0.2174 0.0199 0.3659 5.6 7eap-a1-m1-cA_7eap-a1-m2-cA
22 7eap-a1-m1-cA 755 41 0.2174 0.0199 0.3659 5.6 7eap-a1-m1-cA_7eap-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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