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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
NIQDQFLNQIRKENTYVTVFLLNGFQLRGQVKGFDNFTVLLESEGKQQLIYKHAISTFAP
QKNVQL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3ahu-a1-m1-cC 66 66 1.0000 1.0000 1.0000 5.21e-43 3ahu-a1-m1-cA_3ahu-a1-m1-cC
2 3ahu-a1-m1-cA 66 66 1.0000 1.0000 1.0000 5.21e-43 3ahu-a1-m1-cA_3ahu-a1-m1-cC
3 7og8-a1-m6-cA 68 65 0.4848 0.4706 0.4923 2.74e-20 7og8-a1-m2-cA_7og8-a1-m6-cA
4 7og8-a1-m2-cA 68 65 0.4848 0.4706 0.4923 2.74e-20 7og8-a1-m2-cA_7og8-a1-m6-cA
5 1hk9-a1-m1-cA 64 64 0.4394 0.4531 0.4531 1.24e-17 1hk9-a1-m1-cB_1hk9-a1-m1-cA
6 1hk9-a1-m1-cB 63 64 0.4394 0.4603 0.4531 1.46e-17 1hk9-a1-m1-cB_1hk9-a1-m1-cA
7 6xyj-a1-m1-cCCC 79 78 0.4545 0.3797 0.3846 2.41e-17 6xyj-a1-m1-cCCC_6xyj-a1-m1-cDDD
8 6xyj-a1-m1-cDDD 80 78 0.4545 0.3750 0.3846 2.70e-17 6xyj-a1-m1-cCCC_6xyj-a1-m1-cDDD
9 3u7i-a2-m1-cD 212 35 0.1818 0.0566 0.3429 0.12 3u7i-a2-m1-cD_3u7i-a2-m1-cB
10 3u7i-a2-m1-cB 213 35 0.1818 0.0563 0.3429 0.13 3u7i-a2-m1-cD_3u7i-a2-m1-cB
11 2hoe-a1-m2-cA 346 53 0.2576 0.0491 0.3208 1.7 2hoe-a1-m1-cA_2hoe-a1-m2-cA
12 2hoe-a1-m1-cA 346 53 0.2576 0.0491 0.3208 1.7 2hoe-a1-m1-cA_2hoe-a1-m2-cA
13 6mze-a2-m1-cS 490 48 0.1970 0.0265 0.2708 8.5 6mze-a2-m1-cS_6mze-a2-m1-cZ
14 6mze-a2-m1-cZ 492 48 0.1970 0.0264 0.2708 8.9 6mze-a2-m1-cS_6mze-a2-m1-cZ

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Reference:
Jacob Schwartz et al.

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