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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=53)
NKAQRLQTELDVSEQVQRDFVKLSQTLQVQLERIRQADSLERIRAILNDTKLT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1tu3-a3-m2-cJ 53 53 1.0000 1.0000 1.0000 9.43e-31 1tu3-a3-m1-cJ_1tu3-a3-m2-cJ
2 1tu3-a3-m1-cJ 53 53 1.0000 1.0000 1.0000 9.43e-31 1tu3-a3-m1-cJ_1tu3-a3-m2-cJ
3 6qpx-a1-m4-cA 454 36 0.2075 0.0242 0.3056 2.1 6qpx-a1-m2-cA_6qpx-a1-m4-cA
4 6qpx-a1-m2-cA 454 36 0.2075 0.0242 0.3056 2.1 6qpx-a1-m2-cA_6qpx-a1-m4-cA
5 2ylz-a1-m2-cA 533 31 0.2453 0.0244 0.4194 3.0 2ylz-a1-m1-cA_2ylz-a1-m2-cA
6 2ylz-a1-m1-cA 533 31 0.2453 0.0244 0.4194 3.0 2ylz-a1-m1-cA_2ylz-a1-m2-cA
7 5a8j-a1-m2-cA 365 41 0.2075 0.0301 0.2683 3.8 5a8j-a1-m1-cA_5a8j-a1-m2-cA
8 5a8j-a1-m1-cA 365 41 0.2075 0.0301 0.2683 3.8 5a8j-a1-m1-cA_5a8j-a1-m2-cA
9 6v1q-a1-m1-cB 538 18 0.1887 0.0186 0.5556 6.8 6v1q-a1-m1-cA_6v1q-a1-m1-cB
10 6v1q-a1-m1-cA 538 18 0.1887 0.0186 0.5556 6.8 6v1q-a1-m1-cA_6v1q-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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