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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=89)
NKNIDTVREIITVASILIKFSREDIVENRANFIAFLNEIGVTHEGRKLNQNSFRKIVSEL
TQEDKKTLIDEFNEGFEGVYRYLEMYTNK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1tkv-a1-m1-cB 89 89 1.0000 1.0000 1.0000 9.85e-60 1tkv-a1-m1-cA_1tkv-a1-m1-cB
2 1tkv-a1-m1-cA 89 89 1.0000 1.0000 1.0000 9.85e-60 1tkv-a1-m1-cA_1tkv-a1-m1-cB
3 2yfr-a2-m2-cA 533 41 0.1685 0.0281 0.3659 2.0 2yfr-a2-m1-cA_2yfr-a2-m2-cA
4 2yfr-a2-m1-cA 533 41 0.1685 0.0281 0.3659 2.0 2yfr-a2-m1-cA_2yfr-a2-m2-cA
5 2yft-a2-m2-cA 519 41 0.1685 0.0289 0.3659 2.2 2yft-a2-m1-cA_2yft-a2-m2-cA
6 2yft-a2-m1-cA 519 41 0.1685 0.0289 0.3659 2.2 2yft-a2-m1-cA_2yft-a2-m2-cA
7 3ty5-a1-m1-cB 381 39 0.1573 0.0367 0.3590 3.8 3ty5-a1-m1-cA_3ty5-a1-m1-cB
8 1xhd-a2-m3-cA 169 38 0.1348 0.0710 0.3158 4.6 1xhd-a2-m2-cA_1xhd-a2-m3-cA
9 1xhd-a2-m2-cA 169 38 0.1348 0.0710 0.3158 4.6 1xhd-a2-m2-cA_1xhd-a2-m3-cA
10 3gfz-a1-m1-cA 393 29 0.1124 0.0254 0.3448 9.3 3gfz-a1-m1-cA_3gfz-a1-m1-cB
11 3gfz-a1-m1-cB 394 29 0.1124 0.0254 0.3448 9.3 3gfz-a1-m1-cA_3gfz-a1-m1-cB
12 4zhj-a1-m1-cB 1233 39 0.1573 0.0114 0.3590 10.0 4zhj-a1-m1-cB_4zhj-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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