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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=94)
NLGQSLHQEGFSIPLLWLQNCLIRAADDREEDGCSQAVPLVPLTEENEEAMENEQFQQLL
RKLGVRPPASGQETFWRIPAKLSPTQLRRAAASL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4xht-a1-m1-cA 94 94 1.0000 1.0000 1.0000 4.85e-65 4xht-a1-m1-cB_4xht-a1-m1-cA
2 4xhw-a3-m1-cB 91 92 0.9574 0.9890 0.9783 7.05e-60 4xhw-a3-m1-cD_4xhw-a3-m1-cB
3 4xht-a1-m1-cB 92 94 0.9681 0.9891 0.9681 7.35e-60 4xht-a1-m1-cB_4xht-a1-m1-cA
4 4xhw-a3-m1-cD 90 92 0.9468 0.9889 0.9674 3.34e-57 4xhw-a3-m1-cA_4xhw-a3-m1-cD, 4xhw-a3-m1-cD_4xhw-a3-m1-cB
5 4xhw-a3-m1-cA 88 92 0.9255 0.9886 0.9457 1.57e-54 4xhw-a3-m1-cA_4xhw-a3-m1-cD
6 2o3i-a2-m2-cB 365 43 0.1702 0.0438 0.3721 2.7 2o3i-a2-m2-cB_2o3i-a2-m1-cA, 2o3i-a2-m2-cB_2o3i-a2-m2-cA
7 2o3i-a2-m2-cA 366 43 0.1702 0.0437 0.3721 2.8 2o3i-a2-m2-cB_2o3i-a2-m2-cA
8 2o3i-a2-m1-cA 366 43 0.1702 0.0437 0.3721 2.8 2o3i-a2-m2-cB_2o3i-a2-m1-cA

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Reference:
Jacob Schwartz et al.

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