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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
NLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTT
HIRTHT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1f2i-a2-m1-cJ 66 66 1.0000 1.0000 1.0000 3.63e-45 1f2i-a2-m1-cI_1f2i-a2-m1-cJ
2 1f2i-a2-m1-cI 66 66 1.0000 1.0000 1.0000 3.63e-45 1f2i-a2-m1-cI_1f2i-a2-m1-cJ
3 1llm-a1-m1-cC 87 52 0.4545 0.3448 0.5769 1.12e-14 1llm-a1-m1-cD_1llm-a1-m1-cC
4 1llm-a1-m1-cC 87 26 0.3939 0.2989 1.0000 3.27e-13 1llm-a1-m1-cD_1llm-a1-m1-cC
5 1llm-a1-m1-cD 85 52 0.4545 0.3529 0.5769 1.14e-14 1llm-a1-m1-cD_1llm-a1-m1-cC
6 1llm-a1-m1-cD 85 26 0.3939 0.3059 1.0000 3.60e-13 1llm-a1-m1-cD_1llm-a1-m1-cC
7 8h9h-a1-m1-cG 81 52 0.3636 0.2963 0.4615 4.16e-12 8h9h-a1-m1-cF_8h9h-a1-m1-cG
8 8h9h-a1-m1-cG 81 55 0.3485 0.2840 0.4182 3.81e-10 8h9h-a1-m1-cF_8h9h-a1-m1-cG
9 5v3g-a1-m1-cD 170 56 0.4242 0.1647 0.5000 1.57e-11 5v3g-a1-m1-cG_5v3g-a1-m1-cD
10 5v3g-a1-m1-cD 170 56 0.4091 0.1588 0.4821 4.19e-10 5v3g-a1-m1-cG_5v3g-a1-m1-cD
11 5v3g-a1-m1-cD 170 56 0.3939 0.1529 0.4643 1.75e-09 5v3g-a1-m1-cG_5v3g-a1-m1-cD
12 5v3g-a1-m1-cD 170 56 0.3788 0.1471 0.4464 9.48e-09 5v3g-a1-m1-cG_5v3g-a1-m1-cD
13 5v3g-a1-m1-cD 170 56 0.3939 0.1529 0.4643 1.47e-08 5v3g-a1-m1-cG_5v3g-a1-m1-cD
14 5v3g-a1-m1-cD 170 27 0.2273 0.0882 0.5556 0.003 5v3g-a1-m1-cG_5v3g-a1-m1-cD
15 1un6-a2-m1-cB 86 28 0.2273 0.1744 0.5357 1.57e-05 1un6-a2-m1-cD_1un6-a2-m1-cB
16 1un6-a2-m1-cB 86 56 0.2727 0.2093 0.3214 6.67e-04 1un6-a2-m1-cD_1un6-a2-m1-cB
17 2j7j-a1-m2-cA 85 28 0.2273 0.1765 0.5357 1.58e-05 2j7j-a1-m1-cA_2j7j-a1-m2-cA
18 2j7j-a1-m2-cA 85 56 0.2727 0.2118 0.3214 6.22e-04 2j7j-a1-m1-cA_2j7j-a1-m2-cA
19 2j7j-a1-m1-cA 85 28 0.2273 0.1765 0.5357 1.58e-05 2j7j-a1-m1-cA_2j7j-a1-m2-cA
20 2j7j-a1-m1-cA 85 56 0.2727 0.2118 0.3214 6.22e-04 2j7j-a1-m1-cA_2j7j-a1-m2-cA
21 1un6-a2-m1-cD 58 28 0.2273 0.2586 0.5357 1.66e-05 1un6-a2-m1-cD_1un6-a2-m1-cB
22 6a57-a1-m2-cA 131 54 0.2727 0.1374 0.3333 2.37e-05 6a57-a1-m1-cA_6a57-a1-m2-cA
23 6a57-a1-m2-cA 131 35 0.2273 0.1145 0.4286 5.38e-05 6a57-a1-m1-cA_6a57-a1-m2-cA
24 6a57-a1-m1-cA 131 54 0.2727 0.1374 0.3333 2.37e-05 6a57-a1-m1-cA_6a57-a1-m2-cA
25 6a57-a1-m1-cA 131 35 0.2273 0.1145 0.4286 5.38e-05 6a57-a1-m1-cA_6a57-a1-m2-cA
26 4m9v-a3-m1-cF 60 58 0.2576 0.2833 0.2931 7.72e-04 4m9v-a3-m1-cC_4m9v-a3-m1-cF
27 4m9v-a3-m1-cC 60 58 0.2576 0.2833 0.2931 7.72e-04 4m9v-a3-m1-cC_4m9v-a3-m1-cF
28 5v3g-a1-m1-cG 26 26 0.2121 0.5385 0.5385 0.001 5v3g-a1-m1-cG_5v3g-a1-m1-cD
29 5v3g-a1-m1-cG 26 27 0.1818 0.4615 0.4444 2.8 5v3g-a1-m1-cG_5v3g-a1-m1-cD
30 7t91-a1-m1-cB 62 60 0.2727 0.2903 0.3000 0.48 7t91-a1-m1-cB_7t91-a1-m1-cA
31 7t91-a1-m1-cA 67 60 0.2727 0.2687 0.3000 0.51 7t91-a1-m1-cB_7t91-a1-m1-cA
32 8h9h-a1-m1-cF 25 27 0.1364 0.3600 0.3333 2.6 8h9h-a1-m1-cF_8h9h-a1-m1-cG
33 8h9h-a1-m1-cF 25 25 0.1364 0.3600 0.3600 3.6 8h9h-a1-m1-cF_8h9h-a1-m1-cG
34 1s0y-a2-m1-cK 61 19 0.1364 0.1475 0.4737 8.3 1s0y-a2-m1-cK_1s0y-a2-m1-cG
35 1s0y-a2-m1-cG 62 19 0.1364 0.1452 0.4737 8.4 1s0y-a2-m1-cK_1s0y-a2-m1-cG

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Reference:
Jacob Schwartz et al.

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