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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
NLQQPRMATERGNLVFLTGSAQNIEFRTGSLGKIKLNDEDLSECLHQIQKNKEDIIELKG
SAIGLPQNISSQIYQLNSKLVDL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6gje-a1-m1-cC 83 83 1.0000 1.0000 1.0000 3.51e-56 6gje-a1-m1-cB_6gje-a1-m1-cC, 6gje-a1-m1-cD_6gje-a1-m1-cC
2 6gje-a1-m1-cD 82 82 0.9880 1.0000 1.0000 1.26e-55 6gje-a1-m1-cD_6gje-a1-m1-cC
3 6gje-a1-m1-cB 82 81 0.9759 0.9878 1.0000 6.53e-55 6gje-a1-m1-cB_6gje-a1-m1-cC
4 5ch3-a2-m2-cA 566 20 0.1325 0.0194 0.5500 0.47 5ch3-a2-m1-cA_5ch3-a2-m2-cA
5 5ch3-a2-m1-cA 566 20 0.1325 0.0194 0.5500 0.47 5ch3-a2-m1-cA_5ch3-a2-m2-cA
6 5ikx-a1-m1-cB 569 20 0.1325 0.0193 0.5500 0.47 5ikx-a1-m1-cA_5ikx-a1-m1-cB
7 5ikx-a1-m1-cA 569 20 0.1325 0.0193 0.5500 0.47 5ikx-a1-m1-cA_5ikx-a1-m1-cB
8 2r2o-a1-m1-cA 99 20 0.0964 0.0808 0.4000 5.5 2r2o-a1-m1-cA_2r2o-a1-m1-cB
9 2r2o-a1-m1-cB 102 20 0.0964 0.0784 0.4000 5.5 2r2o-a1-m1-cA_2r2o-a1-m1-cB
10 2rex-a5-m1-cC 107 20 0.0964 0.0748 0.4000 5.8 2rex-a5-m1-cA_2rex-a5-m1-cC
11 2rex-a5-m1-cA 107 20 0.0964 0.0748 0.4000 5.8 2rex-a5-m1-cA_2rex-a5-m1-cC

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Reference:
Jacob Schwartz et al.

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