Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
NLRVTDVTSTSVTLSWRGYPWATGYRVEYREAGGEWKEVTVPGDLSHRYTVTGLKPGTEY
EFRVRAVSSVSVTTGHHHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5j7k-a2-m1-cF 79 79 1.0000 1.0000 1.0000 1.29e-52 5j7k-a2-m1-cF_5j7k-a2-m1-cB
2 5j7k-a1-m1-cA 84 82 1.0000 0.9405 0.9634 3.12e-50 5j7k-a1-m1-cC_5j7k-a1-m1-cA
3 5j7k-a2-m1-cB 90 85 0.9873 0.8667 0.9176 4.51e-49 5j7k-a2-m1-cF_5j7k-a2-m1-cB
4 5j7k-a2-m1-cG 85 85 0.9873 0.9176 0.9176 3.74e-47 5j7k-a2-m1-cD_5j7k-a2-m1-cG
5 5j7k-a1-m1-cC 78 80 0.9367 0.9487 0.9250 1.03e-44 5j7k-a1-m1-cC_5j7k-a1-m1-cA
6 5j7k-a2-m1-cD 54 74 0.6076 0.8889 0.6486 7.05e-18 5j7k-a2-m1-cD_5j7k-a2-m1-cG
7 4lpu-a1-m1-cB 93 77 0.3924 0.3333 0.4026 5.12e-10 4lpu-a1-m1-cA_4lpu-a1-m1-cB
8 4lpu-a1-m1-cA 93 77 0.3924 0.3333 0.4026 5.12e-10 4lpu-a1-m1-cA_4lpu-a1-m1-cB
9 4yfg-a1-m1-cB 481 69 0.3291 0.0541 0.3768 5.28e-07 4yfg-a1-m1-cA_4yfg-a1-m1-cB
10 4yfg-a1-m1-cA 481 69 0.3291 0.0541 0.3768 5.28e-07 4yfg-a1-m1-cA_4yfg-a1-m1-cB
11 2ck2-a1-m1-cA 94 71 0.3544 0.2979 0.3944 5.95e-07 2ck2-a1-m1-cA_2ck2-a1-m1-cB
12 2ck2-a1-m1-cB 96 71 0.3544 0.2917 0.3944 6.19e-07 2ck2-a1-m1-cA_2ck2-a1-m1-cB
13 6bqo-a2-m2-cC 95 70 0.3671 0.3053 0.4143 4.94e-06 6bqo-a2-m1-cC_6bqo-a2-m2-cC
14 6bqo-a2-m1-cC 95 70 0.3671 0.3053 0.4143 4.94e-06 6bqo-a2-m1-cC_6bqo-a2-m2-cC
15 3b83-a1-m8-cG 99 94 0.3797 0.3030 0.3191 3.71e-04 3b83-a1-m2-cA_3b83-a1-m8-cG, 3b83-a1-m2-cE_3b83-a1-m8-cG
16 3b83-a1-m4-cE 99 94 0.3797 0.3030 0.3191 3.71e-04 3b83-a1-m1-cC_3b83-a1-m4-cE, 3b83-a1-m4-cC_3b83-a1-m4-cE, 3b83-a1-m4-cF_3b83-a1-m4-cE
17 3b83-a1-m4-cC 99 94 0.3797 0.3030 0.3191 3.71e-04 3b83-a1-m4-cC_3b83-a1-m4-cE
18 3b83-a1-m2-cE 99 94 0.3797 0.3030 0.3191 3.71e-04 3b83-a1-m2-cE_3b83-a1-m8-cG
19 3b83-a1-m1-cC 99 94 0.3797 0.3030 0.3191 3.71e-04 3b83-a1-m1-cC_3b83-a1-m4-cE
20 1bqu-a1-m1-cA 208 74 0.2911 0.1106 0.3108 0.002 1bqu-a1-m1-cA_1bqu-a1-m1-cB
21 3b83-a1-m2-cA 95 70 0.2785 0.2316 0.3143 0.007 3b83-a1-m2-cA_3b83-a1-m8-cG, 3b83-a1-m8-cB_3b83-a1-m2-cA
22 3b83-a1-m8-cB 92 70 0.2785 0.2391 0.3143 0.007 3b83-a1-m8-cB_3b83-a1-m2-cA, 3b83-a1-m8-cD_3b83-a1-m8-cB
23 3b83-a1-m4-cF 92 70 0.2785 0.2391 0.3143 0.007 3b83-a1-m4-cF_3b83-a1-m4-cE
24 3b83-a5-m1-cD 91 70 0.2785 0.2418 0.3143 0.007 3b83-a5-m1-cD_3b83-a5-m1-cH
25 3b83-a1-m8-cD 91 70 0.2785 0.2418 0.3143 0.007 3b83-a1-m8-cD_3b83-a1-m8-cB
26 3b83-a1-m5-cD 91 70 0.2785 0.2418 0.3143 0.007 3b83-a1-m5-cD_3b83-a1-m8-cH
27 3b83-a5-m1-cH 94 70 0.2785 0.2340 0.3143 0.007 3b83-a5-m1-cD_3b83-a5-m1-cH
28 3b83-a1-m8-cH 94 70 0.2785 0.2340 0.3143 0.007 3b83-a1-m5-cD_3b83-a1-m8-cH
29 3t1w-a1-m2-cA 368 70 0.2911 0.0625 0.3286 0.011 3t1w-a1-m1-cA_3t1w-a1-m2-cA
30 3t1w-a1-m2-cA 368 71 0.3038 0.0652 0.3380 0.16 3t1w-a1-m1-cA_3t1w-a1-m2-cA
31 3t1w-a1-m2-cA 368 72 0.2658 0.0571 0.2917 1.8 3t1w-a1-m1-cA_3t1w-a1-m2-cA
32 3t1w-a1-m1-cA 368 70 0.2911 0.0625 0.3286 0.011 3t1w-a1-m1-cA_3t1w-a1-m2-cA
33 3t1w-a1-m1-cA 368 71 0.3038 0.0652 0.3380 0.16 3t1w-a1-m1-cA_3t1w-a1-m2-cA
34 3t1w-a1-m1-cA 368 72 0.2658 0.0571 0.2917 1.8 3t1w-a1-m1-cA_3t1w-a1-m2-cA
35 1bqu-a1-m1-cB 215 46 0.2152 0.0791 0.3696 0.013 1bqu-a1-m1-cA_1bqu-a1-m1-cB
36 7y8s-a1-m1-cA 275 44 0.2278 0.0655 0.4091 0.018 7y8s-a1-m1-cA_7y8s-a1-m1-cB
37 7mrm-a1-m1-cA 365 78 0.3038 0.0658 0.3077 0.019 7mrm-a1-m1-cB_7mrm-a1-m1-cA
38 7mrm-a1-m1-cB 360 78 0.3038 0.0667 0.3077 0.021 7mrm-a1-m1-cB_7mrm-a1-m1-cA
39 7y8s-a1-m1-cB 288 44 0.2278 0.0625 0.4091 0.022 7y8s-a1-m1-cA_7y8s-a1-m1-cB
40 3g1w-a1-m1-cB 284 56 0.2278 0.0634 0.3214 0.053 3g1w-a1-m1-cB_3g1w-a1-m1-cA
41 3g1w-a1-m1-cA 285 56 0.2278 0.0632 0.3214 0.054 3g1w-a1-m1-cB_3g1w-a1-m1-cA
42 2rbl-a1-m1-cB 89 67 0.2278 0.2022 0.2687 0.13 2rbl-a1-m1-cA_2rbl-a1-m1-cB
43 2rbl-a1-m1-cA 89 67 0.2278 0.2022 0.2687 0.13 2rbl-a1-m1-cA_2rbl-a1-m1-cB
44 5x83-a1-m1-cD 195 19 0.1646 0.0667 0.6842 0.25 5x83-a1-m1-cD_5x83-a1-m1-cB
45 5x83-a1-m1-cB 202 19 0.1646 0.0644 0.6842 0.26 5x83-a1-m1-cD_5x83-a1-m1-cB
46 8d7h-a1-m1-cE 303 53 0.2278 0.0594 0.3396 0.41 8d7h-a1-m1-cA_8d7h-a1-m1-cE
47 8d7h-a1-m1-cA 303 53 0.2278 0.0594 0.3396 0.41 8d7h-a1-m1-cA_8d7h-a1-m1-cE
48 5myb-a1-m1-cB 191 85 0.2278 0.0942 0.2118 0.51 5myb-a1-m1-cA_5myb-a1-m1-cB
49 5myb-a1-m1-cA 190 85 0.2278 0.0947 0.2118 0.58 5myb-a1-m1-cA_5myb-a1-m1-cB
50 7bu2-a1-m1-cB 339 74 0.2658 0.0619 0.2838 1.0 7bu2-a1-m1-cA_7bu2-a1-m1-cB
51 7bu2-a1-m1-cA 337 74 0.2658 0.0623 0.2838 1.1 7bu2-a1-m1-cA_7bu2-a1-m1-cB
52 7bu3-a1-m1-cA 336 74 0.2658 0.0625 0.2838 1.1 7bu3-a1-m1-cA_7bu3-a1-m1-cB
53 7bu3-a1-m1-cB 337 74 0.2658 0.0623 0.2838 1.1 7bu3-a1-m1-cA_7bu3-a1-m1-cB
54 7v3p-a1-m1-cB 816 96 0.3544 0.0343 0.2917 1.1 7v3p-a1-m1-cA_7v3p-a1-m1-cB
55 7v3p-a1-m1-cA 807 96 0.3544 0.0347 0.2917 1.2 7v3p-a1-m1-cA_7v3p-a1-m1-cB
56 5utk-a1-m1-cA 289 84 0.2405 0.0657 0.2262 1.7 5utk-a1-m1-cB_5utk-a1-m1-cA
57 4bkf-a1-m1-cB 505 69 0.2532 0.0396 0.2899 1.9 4bkf-a1-m1-cA_4bkf-a1-m1-cB
58 4bkf-a1-m1-cA 505 69 0.2532 0.0396 0.2899 1.9 4bkf-a1-m1-cA_4bkf-a1-m1-cB
59 5n06-a1-m1-cA 93 71 0.2785 0.2366 0.3099 2.1 5n06-a1-m1-cB_5n06-a1-m1-cA
60 8a1f-a1-m1-cB 352 41 0.2278 0.0511 0.4390 2.3 8a1f-a1-m1-cB_8a1f-a1-m1-cA
61 8eyr-a1-m1-cB 794 58 0.2532 0.0252 0.3448 2.3 8eyr-a1-m1-cB_8eyr-a1-m1-cA
62 8eyr-a1-m1-cA 795 58 0.2532 0.0252 0.3448 2.3 8eyr-a1-m1-cB_8eyr-a1-m1-cA
63 8a1f-a1-m1-cA 353 41 0.2278 0.0510 0.4390 2.3 8a1f-a1-m1-cB_8a1f-a1-m1-cA
64 7u23-a1-m1-cF 669 35 0.1899 0.0224 0.4286 2.6 7u23-a1-m1-cE_7u23-a1-m1-cF
65 7u23-a1-m1-cE 669 35 0.1899 0.0224 0.4286 2.7 7u23-a1-m1-cE_7u23-a1-m1-cF
66 7xgd-a1-m1-cB 836 77 0.2911 0.0275 0.2987 2.7 7xgd-a1-m1-cA_7xgd-a1-m1-cB
67 7xgd-a1-m1-cA 836 77 0.2911 0.0275 0.2987 2.7 7xgd-a1-m1-cA_7xgd-a1-m1-cB
68 7xlc-a1-m1-cB 829 77 0.2911 0.0277 0.2987 2.8 7xlc-a1-m1-cA_7xlc-a1-m1-cB
69 7xlc-a1-m1-cA 828 77 0.2911 0.0278 0.2987 2.9 7xlc-a1-m1-cA_7xlc-a1-m1-cB
70 5e7t-a1-m3-cA 129 17 0.1392 0.0853 0.6471 3.2 5e7t-a1-m2-cA_5e7t-a1-m3-cA
71 5e7t-a1-m2-cA 129 17 0.1392 0.0853 0.6471 3.2 5e7t-a1-m2-cA_5e7t-a1-m3-cA
72 7cg8-a1-m1-cC 100 23 0.1392 0.1100 0.4783 3.4 7cg8-a1-m1-cC_7cg8-a1-m1-cD
73 5u8r-a1-m2-cA 801 35 0.1899 0.0187 0.4286 3.6 5u8r-a1-m1-cA_5u8r-a1-m2-cA
74 5u8r-a1-m1-cA 801 35 0.1899 0.0187 0.4286 3.6 5u8r-a1-m1-cA_5u8r-a1-m2-cA
75 7cg8-a1-m1-cD 105 23 0.1392 0.1048 0.4783 4.0 7cg8-a1-m1-cA_7cg8-a1-m1-cD, 7cg8-a1-m1-cB_7cg8-a1-m1-cD, 7cg8-a1-m1-cC_7cg8-a1-m1-cD
76 7cg8-a1-m1-cB 105 23 0.1392 0.1048 0.4783 4.0 7cg8-a1-m1-cB_7cg8-a1-m1-cD
77 7cg8-a1-m1-cA 105 23 0.1392 0.1048 0.4783 4.0 7cg8-a1-m1-cA_7cg8-a1-m1-cD
78 4yg8-a2-m6-cA 276 74 0.2405 0.0688 0.2568 4.1 4yg8-a2-m3-cA_4yg8-a2-m6-cA
79 4yg8-a2-m3-cA 276 74 0.2405 0.0688 0.2568 4.1 4yg8-a2-m3-cA_4yg8-a2-m6-cA
80 2gys-a1-m1-cA 397 46 0.1772 0.0353 0.3043 4.5 2gys-a1-m1-cA_2gys-a1-m1-cB
81 3mtr-a1-m1-cA 197 63 0.2785 0.1117 0.3492 4.9 3mtr-a1-m1-cA_3mtr-a1-m1-cB
82 3a70-a1-m1-cA 608 38 0.1519 0.0197 0.3158 5.1 3a70-a1-m1-cA_3a70-a1-m1-cC
83 2gys-a1-m1-cB 406 46 0.1772 0.0345 0.3043 5.2 2gys-a1-m1-cA_2gys-a1-m1-cB
84 3mtr-a1-m1-cB 197 63 0.2785 0.1117 0.3492 5.2 3mtr-a1-m1-cA_3mtr-a1-m1-cB
85 3igh-a1-m2-cX 483 26 0.1266 0.0207 0.3846 5.2 3igh-a1-m1-cX_3igh-a1-m2-cX
86 3igh-a1-m1-cX 483 26 0.1266 0.0207 0.3846 5.2 3igh-a1-m1-cX_3igh-a1-m2-cX
87 1jdp-a1-m1-cB 395 25 0.1139 0.0228 0.3600 6.4 1jdp-a1-m1-cB_1jdp-a1-m1-cA
88 1jdp-a1-m1-cA 396 25 0.1139 0.0227 0.3600 6.4 1jdp-a1-m1-cB_1jdp-a1-m1-cA
89 2vkw-a1-m1-cA 197 63 0.2785 0.1117 0.3492 7.0 2vkw-a1-m1-cB_2vkw-a1-m1-cA
90 2vkx-a2-m1-cD 198 63 0.2785 0.1111 0.3492 7.5 2vkx-a2-m1-cC_2vkx-a2-m1-cD
91 2vkx-a2-m1-cC 198 63 0.2785 0.1111 0.3492 7.5 2vkx-a2-m1-cC_2vkx-a2-m1-cD
92 2vkw-a1-m1-cB 195 63 0.2785 0.1128 0.3492 7.9 2vkw-a1-m1-cB_2vkw-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600