Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=85)
NLRVTDVTSTSVTLSWRGYPWATGYRVEYREAGGWKEVTVPGDLSHRYTVTGLKPGTEYE
FRVRAVNRVGRPSSVSVTTGHHHHH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5j7k-a2-m1-cG 85 85 1.0000 1.0000 1.0000 3.86e-57 5j7k-a2-m1-cD_5j7k-a2-m1-cG
2 5j7k-a2-m1-cB 90 86 0.9765 0.9222 0.9651 7.14e-53 5j7k-a2-m1-cF_5j7k-a2-m1-cB
3 5j7k-a1-m1-cA 84 86 0.9647 0.9762 0.9535 4.22e-51 5j7k-a1-m1-cC_5j7k-a1-m1-cA
4 5j7k-a2-m1-cF 79 85 0.9176 0.9873 0.9176 4.03e-47 5j7k-a2-m1-cF_5j7k-a2-m1-cB
5 5j7k-a1-m1-cC 78 86 0.8941 0.9744 0.8837 1.16e-43 5j7k-a1-m1-cC_5j7k-a1-m1-cA
6 5j7k-a2-m1-cD 54 79 0.5647 0.8889 0.6076 4.43e-17 5j7k-a2-m1-cD_5j7k-a2-m1-cG
7 4lpu-a1-m1-cB 93 88 0.4235 0.3871 0.4091 6.08e-11 4lpu-a1-m1-cA_4lpu-a1-m1-cB
8 4lpu-a1-m1-cA 93 88 0.4235 0.3871 0.4091 6.08e-11 4lpu-a1-m1-cA_4lpu-a1-m1-cB
9 4yfg-a1-m1-cB 481 80 0.3882 0.0686 0.4125 1.03e-08 4yfg-a1-m1-cA_4yfg-a1-m1-cB
10 4yfg-a1-m1-cA 481 80 0.3882 0.0686 0.4125 1.03e-08 4yfg-a1-m1-cA_4yfg-a1-m1-cB
11 2ck2-a1-m1-cA 94 78 0.3647 0.3298 0.3974 4.11e-07 2ck2-a1-m1-cA_2ck2-a1-m1-cB
12 2ck2-a1-m1-cB 96 70 0.3294 0.2917 0.4000 8.77e-07 2ck2-a1-m1-cA_2ck2-a1-m1-cB
13 3b83-a1-m8-cG 99 95 0.4000 0.3434 0.3579 9.10e-07 3b83-a1-m2-cA_3b83-a1-m8-cG, 3b83-a1-m2-cE_3b83-a1-m8-cG
14 3b83-a1-m4-cE 99 95 0.4000 0.3434 0.3579 9.10e-07 3b83-a1-m1-cC_3b83-a1-m4-cE, 3b83-a1-m4-cC_3b83-a1-m4-cE, 3b83-a1-m4-cF_3b83-a1-m4-cE
15 3b83-a1-m4-cC 99 95 0.4000 0.3434 0.3579 9.10e-07 3b83-a1-m4-cC_3b83-a1-m4-cE
16 3b83-a1-m2-cE 99 95 0.4000 0.3434 0.3579 9.10e-07 3b83-a1-m2-cE_3b83-a1-m8-cG
17 3b83-a1-m1-cC 99 95 0.4000 0.3434 0.3579 9.10e-07 3b83-a1-m1-cC_3b83-a1-m4-cE
18 7mrm-a1-m1-cA 365 79 0.3176 0.0740 0.3418 1.65e-05 7mrm-a1-m1-cB_7mrm-a1-m1-cA
19 7mrm-a1-m1-cB 360 79 0.3176 0.0750 0.3418 1.67e-05 7mrm-a1-m1-cB_7mrm-a1-m1-cA
20 6bqo-a2-m2-cC 95 70 0.3294 0.2947 0.4000 4.24e-05 6bqo-a2-m1-cC_6bqo-a2-m2-cC
21 6bqo-a2-m1-cC 95 70 0.3294 0.2947 0.4000 4.24e-05 6bqo-a2-m1-cC_6bqo-a2-m2-cC
22 1bqu-a1-m1-cA 208 79 0.2941 0.1202 0.3165 6.13e-05 1bqu-a1-m1-cA_1bqu-a1-m1-cB
23 3b83-a1-m2-cA 95 92 0.3647 0.3263 0.3370 1.66e-04 3b83-a1-m2-cA_3b83-a1-m8-cG, 3b83-a1-m8-cB_3b83-a1-m2-cA
24 1bqu-a1-m1-cB 215 51 0.2235 0.0884 0.3725 4.82e-04 1bqu-a1-m1-cA_1bqu-a1-m1-cB
25 7y8s-a1-m1-cA 275 62 0.3294 0.1018 0.4516 8.00e-04 7y8s-a1-m1-cA_7y8s-a1-m1-cB
26 7y8s-a1-m1-cA 275 28 0.1176 0.0364 0.3571 4.1 7y8s-a1-m1-cA_7y8s-a1-m1-cB
27 7y8s-a1-m1-cB 288 62 0.3294 0.0972 0.4516 0.001 7y8s-a1-m1-cA_7y8s-a1-m1-cB
28 7y8s-a1-m1-cB 288 28 0.1176 0.0347 0.3571 4.3 7y8s-a1-m1-cA_7y8s-a1-m1-cB
29 3b83-a5-m1-cH 94 91 0.3529 0.3191 0.3297 0.002 3b83-a5-m1-cD_3b83-a5-m1-cH
30 3b83-a1-m8-cH 94 91 0.3529 0.3191 0.3297 0.002 3b83-a1-m5-cD_3b83-a1-m8-cH
31 3b83-a1-m8-cB 92 89 0.3529 0.3261 0.3371 0.002 3b83-a1-m8-cB_3b83-a1-m2-cA, 3b83-a1-m8-cD_3b83-a1-m8-cB
32 3b83-a1-m4-cF 92 89 0.3529 0.3261 0.3371 0.002 3b83-a1-m4-cF_3b83-a1-m4-cE
33 3b83-a5-m1-cD 91 89 0.3529 0.3297 0.3371 0.002 3b83-a5-m1-cD_3b83-a5-m1-cH
34 3b83-a1-m8-cD 91 89 0.3529 0.3297 0.3371 0.002 3b83-a1-m8-cD_3b83-a1-m8-cB
35 3b83-a1-m5-cD 91 89 0.3529 0.3297 0.3371 0.002 3b83-a1-m5-cD_3b83-a1-m8-cH
36 5myb-a1-m1-cB 191 76 0.2235 0.0995 0.2500 0.002 5myb-a1-m1-cA_5myb-a1-m1-cB
37 5myb-a1-m1-cA 190 76 0.2235 0.1000 0.2500 0.002 5myb-a1-m1-cA_5myb-a1-m1-cB
38 3t1w-a1-m2-cA 368 84 0.2941 0.0679 0.2976 0.006 3t1w-a1-m1-cA_3t1w-a1-m2-cA
39 3t1w-a1-m2-cA 368 87 0.3412 0.0788 0.3333 0.069 3t1w-a1-m1-cA_3t1w-a1-m2-cA
40 3t1w-a1-m2-cA 368 72 0.2353 0.0543 0.2778 4.1 3t1w-a1-m1-cA_3t1w-a1-m2-cA
41 3t1w-a1-m1-cA 368 84 0.2941 0.0679 0.2976 0.006 3t1w-a1-m1-cA_3t1w-a1-m2-cA
42 3t1w-a1-m1-cA 368 87 0.3412 0.0788 0.3333 0.069 3t1w-a1-m1-cA_3t1w-a1-m2-cA
43 3t1w-a1-m1-cA 368 72 0.2353 0.0543 0.2778 4.1 3t1w-a1-m1-cA_3t1w-a1-m2-cA
44 2rbl-a1-m1-cB 89 83 0.3176 0.3034 0.3253 0.013 2rbl-a1-m1-cA_2rbl-a1-m1-cB
45 2rbl-a1-m1-cA 89 83 0.3176 0.3034 0.3253 0.013 2rbl-a1-m1-cA_2rbl-a1-m1-cB
46 5utk-a1-m1-cB 280 76 0.2235 0.0679 0.2500 0.11 5utk-a1-m1-cB_5utk-a1-m1-cA
47 5x83-a1-m1-cD 195 34 0.2118 0.0923 0.5294 0.23 5x83-a1-m1-cD_5x83-a1-m1-cB
48 5x83-a1-m1-cB 202 34 0.2118 0.0891 0.5294 0.28 5x83-a1-m1-cD_5x83-a1-m1-cB
49 4yg8-a2-m6-cA 276 75 0.2471 0.0761 0.2800 0.56 4yg8-a2-m3-cA_4yg8-a2-m6-cA
50 4yg8-a2-m3-cA 276 75 0.2471 0.0761 0.2800 0.56 4yg8-a2-m3-cA_4yg8-a2-m6-cA
51 5utk-a1-m1-cA 289 76 0.2235 0.0657 0.2500 0.69 5utk-a1-m1-cB_5utk-a1-m1-cA
52 8d7h-a1-m1-cE 303 53 0.2000 0.0561 0.3208 1.5 8d7h-a1-m1-cA_8d7h-a1-m1-cE
53 8d7h-a1-m1-cA 303 53 0.2000 0.0561 0.3208 1.5 8d7h-a1-m1-cA_8d7h-a1-m1-cE
54 7cg8-a1-m1-cC 100 43 0.1529 0.1300 0.3023 1.9 7cg8-a1-m1-cC_7cg8-a1-m1-cD
55 5n06-a1-m1-cA 93 71 0.2588 0.2366 0.3099 2.2 5n06-a1-m1-cB_5n06-a1-m1-cA
56 7cg8-a1-m1-cD 105 43 0.1529 0.1238 0.3023 2.6 7cg8-a1-m1-cA_7cg8-a1-m1-cD, 7cg8-a1-m1-cB_7cg8-a1-m1-cD, 7cg8-a1-m1-cC_7cg8-a1-m1-cD
57 7cg8-a1-m1-cB 105 43 0.1529 0.1238 0.3023 2.6 7cg8-a1-m1-cB_7cg8-a1-m1-cD
58 7cg8-a1-m1-cA 105 43 0.1529 0.1238 0.3023 2.6 7cg8-a1-m1-cA_7cg8-a1-m1-cD
59 5e7t-a1-m3-cA 129 17 0.1294 0.0853 0.6471 3.1 5e7t-a1-m2-cA_5e7t-a1-m3-cA
60 5e7t-a1-m2-cA 129 17 0.1294 0.0853 0.6471 3.1 5e7t-a1-m2-cA_5e7t-a1-m3-cA
61 3mtr-a1-m1-cA 197 66 0.2706 0.1168 0.3485 3.4 3mtr-a1-m1-cA_3mtr-a1-m1-cB
62 3mtr-a1-m1-cB 197 66 0.2706 0.1168 0.3485 3.6 3mtr-a1-m1-cA_3mtr-a1-m1-cB
63 2v5y-a1-m2-cA 564 81 0.2706 0.0408 0.2840 3.8 2v5y-a1-m1-cA_2v5y-a1-m2-cA
64 2v5y-a1-m1-cA 564 81 0.2706 0.0408 0.2840 3.8 2v5y-a1-m1-cA_2v5y-a1-m2-cA
65 2vkw-a1-m1-cA 197 66 0.2706 0.1168 0.3485 4.0 2vkw-a1-m1-cB_2vkw-a1-m1-cA
66 2vkx-a2-m1-cD 198 66 0.2706 0.1162 0.3485 4.2 2vkx-a2-m1-cC_2vkx-a2-m1-cD
67 2vkx-a2-m1-cC 198 66 0.2706 0.1162 0.3485 4.2 2vkx-a2-m1-cC_2vkx-a2-m1-cD
68 2vkw-a1-m1-cB 195 66 0.2706 0.1179 0.3485 4.3 2vkw-a1-m1-cB_2vkw-a1-m1-cA
69 1hwh-a1-m2-cB 196 44 0.1765 0.0765 0.3409 5.1 1hwh-a1-m1-cB_1hwh-a1-m2-cB
70 1hwh-a1-m1-cB 196 44 0.1765 0.0765 0.3409 5.1 1hwh-a1-m1-cB_1hwh-a1-m2-cB
71 1hwg-a1-m1-cC 191 44 0.1765 0.0785 0.3409 5.2 1hwg-a1-m1-cC_1hwg-a1-m1-cB
72 1hwg-a1-m1-cB 194 44 0.1765 0.0773 0.3409 5.5 1hwg-a1-m1-cC_1hwg-a1-m1-cB
73 3a70-a1-m1-cA 608 30 0.1412 0.0197 0.4000 5.9 3a70-a1-m1-cA_3a70-a1-m1-cC
74 3o2i-a2-m2-cC 92 17 0.1059 0.0978 0.5294 8.6 3o2i-a2-m1-cC_3o2i-a2-m2-cC
75 3o2i-a2-m1-cC 92 17 0.1059 0.0978 0.5294 8.6 3o2i-a2-m1-cC_3o2i-a2-m2-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600