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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=84)
NLYFQGMIPLEQGIEFLSVNVEEDSPVVGKKLKDLPLPRDSIIAAIVRGGVLVVPRGDTE
ILSGDKLYVIVSAEAKETVEETLL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3jxo-a2-m1-cA 84 84 1.0000 1.0000 1.0000 5.62e-55 3jxo-a2-m1-cA_3jxo-a2-m2-cB
2 3jxo-a2-m2-cB 85 84 1.0000 0.9882 1.0000 7.45e-55 3jxo-a2-m1-cA_3jxo-a2-m2-cB
3 3l4b-a1-m1-cG 211 81 0.8690 0.3460 0.9012 6.95e-41 3l4b-a1-m1-cH_3l4b-a1-m1-cG
4 3l4b-a1-m1-cH 205 79 0.7976 0.3268 0.8481 1.97e-36 3l4b-a1-m1-cH_3l4b-a1-m1-cG
5 5f29-a1-m1-cB 70 51 0.2500 0.3000 0.4118 2.26e-05 5f29-a1-m1-cA_5f29-a1-m1-cB
6 5f29-a1-m1-cA 69 51 0.2500 0.3043 0.4118 2.74e-05 5f29-a1-m1-cA_5f29-a1-m1-cB
7 3jzv-a2-m6-cA 144 47 0.1905 0.1111 0.3404 0.18 3jzv-a2-m1-cA_3jzv-a2-m6-cA, 3jzv-a2-m3-cA_3jzv-a2-m6-cA, 3jzv-a2-m5-cA_3jzv-a2-m6-cA
8 3jzv-a2-m5-cA 144 47 0.1905 0.1111 0.3404 0.18 3jzv-a2-m5-cA_3jzv-a2-m6-cA
9 3jzv-a2-m3-cA 144 47 0.1905 0.1111 0.3404 0.18 3jzv-a2-m3-cA_3jzv-a2-m6-cA
10 3jzv-a2-m1-cA 144 47 0.1905 0.1111 0.3404 0.18 3jzv-a2-m1-cA_3jzv-a2-m6-cA
11 3drw-a1-m1-cA 460 9 0.1071 0.0196 1.0000 7.0 3drw-a1-m1-cB_3drw-a1-m1-cA
12 3k2v-a1-m1-cA 123 46 0.1429 0.0976 0.2609 9.4 3k2v-a1-m1-cB_3k2v-a1-m1-cA
13 3k2v-a1-m1-cB 121 46 0.1429 0.0992 0.2609 9.6 3k2v-a1-m1-cB_3k2v-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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