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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
NLYSSLPLTKREEVEKLLNGDTWRHLAGELGYQPEHIDSFTHEACPVRALLASWGAQDSA
TLDALLAALRRIQRADIVESLCS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4f44-a1-m1-cB 83 83 1.0000 1.0000 1.0000 2.90e-57 4f44-a1-m1-cA_4f44-a1-m1-cB
2 4f44-a1-m1-cA 83 83 1.0000 1.0000 1.0000 2.90e-57 4f44-a1-m1-cA_4f44-a1-m1-cB
3 2n97-a1-m1-cB 94 86 0.9277 0.8191 0.8953 6.16e-43 2n97-a1-m1-cA_2n97-a1-m1-cB
4 2n97-a1-m1-cA 94 86 0.9277 0.8191 0.8953 6.16e-43 2n97-a1-m1-cA_2n97-a1-m1-cB
5 4o6x-a3-m1-cA 98 66 0.2771 0.2347 0.3485 0.003 4o6x-a3-m2-cB_4o6x-a3-m1-cA
6 4o6x-a3-m2-cB 95 66 0.2771 0.2421 0.3485 0.003 4o6x-a3-m2-cB_4o6x-a3-m1-cA
7 5vkq-a1-m1-cD 1499 65 0.2892 0.0160 0.3692 0.20 5vkq-a1-m1-cC_5vkq-a1-m1-cD
8 5vkq-a1-m1-cC 1499 65 0.2892 0.0160 0.3692 0.20 5vkq-a1-m1-cC_5vkq-a1-m1-cD
9 7pqa-a1-m1-cBBB 268 63 0.2651 0.0821 0.3492 0.33 7pqa-a1-m1-cBBB_7pqa-a1-m1-cAAA
10 7pqa-a1-m1-cAAA 275 63 0.2651 0.0800 0.3492 0.34 7pqa-a1-m1-cBBB_7pqa-a1-m1-cAAA
11 4m3p-a1-m1-cB 373 40 0.1566 0.0349 0.3250 0.58 4m3p-a1-m1-cD_4m3p-a1-m1-cB
12 4m3p-a1-m1-cD 371 40 0.1566 0.0350 0.3250 0.62 4m3p-a1-m1-cD_4m3p-a1-m1-cB
13 1umy-a1-m1-cC 380 40 0.1566 0.0342 0.3250 0.63 1umy-a1-m1-cC_1umy-a1-m1-cD
14 1umy-a1-m1-cD 381 40 0.1566 0.0341 0.3250 0.63 1umy-a1-m1-cC_1umy-a1-m1-cD
15 1lt7-a2-m1-cA 305 28 0.1205 0.0328 0.3571 2.3 1lt7-a2-m1-cA_1lt7-a2-m1-cB
16 1lt7-a1-m1-cA 305 28 0.1205 0.0328 0.3571 2.3 1lt7-a1-m1-cA_1lt7-a1-m2-cB
17 1lt7-a2-m1-cB 315 28 0.1205 0.0317 0.3571 2.3 1lt7-a2-m1-cA_1lt7-a2-m1-cB
18 1lt7-a1-m2-cB 315 28 0.1205 0.0317 0.3571 2.3 1lt7-a1-m1-cA_1lt7-a1-m2-cB, 1lt7-a1-m1-cB_1lt7-a1-m2-cB
19 1lt7-a1-m1-cB 315 28 0.1205 0.0317 0.3571 2.3 1lt7-a1-m1-cB_1lt7-a1-m2-cB
20 6fto-a1-m1-cB 66 37 0.1205 0.1515 0.2703 6.4 6fto-a1-m1-cA_6fto-a1-m1-cB
21 6fto-a1-m1-cA 66 37 0.1205 0.1515 0.2703 6.4 6fto-a1-m1-cA_6fto-a1-m1-cB
22 3ne8-a1-m2-cA 224 36 0.1325 0.0491 0.3056 7.1 3ne8-a1-m1-cA_3ne8-a1-m2-cA
23 3ne8-a1-m1-cA 224 36 0.1325 0.0491 0.3056 7.1 3ne8-a1-m1-cA_3ne8-a1-m2-cA
24 3ke4-a1-m1-cB 168 39 0.1325 0.0655 0.2821 8.1 3ke4-a1-m1-cB_3ke4-a1-m1-cC
25 3ke4-a1-m1-cC 169 39 0.1325 0.0651 0.2821 8.1 3ke4-a1-m1-cB_3ke4-a1-m1-cC
26 2afb-a1-m3-cB 319 28 0.1325 0.0345 0.3929 8.6 2afb-a1-m2-cB_2afb-a1-m3-cB, 2afb-a1-m3-cB_2afb-a1-m1-cA, 2afb-a1-m3-cB_2afb-a1-m3-cA
27 2afb-a1-m2-cB 319 28 0.1325 0.0345 0.3929 8.6 2afb-a1-m2-cB_2afb-a1-m3-cB
28 2afb-a1-m3-cA 322 28 0.1325 0.0342 0.3929 8.9 2afb-a1-m3-cB_2afb-a1-m3-cA
29 2afb-a1-m1-cA 322 28 0.1325 0.0342 0.3929 8.9 2afb-a1-m3-cB_2afb-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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