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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=91)
NNAIGSNWKDVRAELFSKEEILESDMRVAIMSELIEARNEKGISQKKLEEMSGVSQPVIA
RMETGKTSPQLDTVLKVLASLGKTLAVVPLE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6af4-a2-m1-cD 92 91 1.0000 0.9891 1.0000 3.42e-61 6af4-a2-m1-cF_6af4-a2-m1-cD
2 6af4-a2-m1-cF 91 91 1.0000 1.0000 1.0000 4.00e-61 6af4-a2-m1-cF_6af4-a2-m1-cD
3 6jq1-a1-m1-cA 129 51 0.2088 0.1473 0.3725 8.47e-05 6jq1-a1-m1-cA_6jq1-a1-m1-cB
4 6jq1-a1-m1-cB 130 51 0.2088 0.1462 0.3725 8.75e-05 6jq1-a1-m1-cA_6jq1-a1-m1-cB
5 3kxa-a2-m1-cD 127 52 0.2308 0.1654 0.4038 7.56e-04 3kxa-a2-m1-cD_3kxa-a2-m1-cC
6 3kxa-a2-m1-cC 128 52 0.2308 0.1641 0.4038 7.73e-04 3kxa-a2-m1-cD_3kxa-a2-m1-cC
7 6rmq-a2-m3-cB 121 51 0.1978 0.1488 0.3529 0.001 6rmq-a2-m1-cB_6rmq-a2-m3-cB
8 6rmq-a2-m1-cB 121 51 0.1978 0.1488 0.3529 0.001 6rmq-a2-m1-cB_6rmq-a2-m3-cB
9 7p4a-a1-m2-cA 241 37 0.1758 0.0664 0.4324 0.004 7p4a-a1-m1-cB_7p4a-a1-m2-cA, 7p4a-a1-m2-cB_7p4a-a1-m2-cA
10 7p4a-a1-m1-cA 241 37 0.1758 0.0664 0.4324 0.004 7p4a-a1-m2-cB_7p4a-a1-m1-cA
11 2b5a-a2-m1-cD 76 44 0.1538 0.1842 0.3182 0.005 2b5a-a2-m1-cC_2b5a-a2-m1-cD
12 2b5a-a2-m1-cC 76 44 0.1538 0.1842 0.3182 0.005 2b5a-a2-m1-cC_2b5a-a2-m1-cD
13 1y7y-a1-m1-cA 69 54 0.1868 0.2464 0.3148 0.021 1y7y-a1-m1-cB_1y7y-a1-m1-cA
14 1y7y-a1-m1-cB 66 54 0.1868 0.2576 0.3148 0.023 1y7y-a1-m1-cB_1y7y-a1-m1-cA
15 2xcj-a1-m1-cB 84 51 0.1209 0.1310 0.2157 0.055 2xcj-a1-m1-cA_2xcj-a1-m1-cB
16 2xcj-a1-m1-cA 84 51 0.1209 0.1310 0.2157 0.055 2xcj-a1-m1-cA_2xcj-a1-m1-cB
17 2r1j-a1-m1-cR 66 61 0.2418 0.3333 0.3607 0.12 2r1j-a1-m1-cL_2r1j-a1-m1-cR
18 2r1j-a1-m1-cL 66 61 0.2418 0.3333 0.3607 0.12 2r1j-a1-m1-cL_2r1j-a1-m1-cR
19 4yba-a1-m1-cB 78 39 0.1209 0.1410 0.2821 0.13 4yba-a1-m1-cA_4yba-a1-m1-cB
20 4yba-a1-m1-cA 77 39 0.1209 0.1429 0.2821 0.14 4yba-a1-m1-cA_4yba-a1-m1-cB
21 3vk0-a2-m1-cC 88 60 0.1758 0.1818 0.2667 0.22 3vk0-a2-m1-cB_3vk0-a2-m1-cC
22 3vk0-a2-m1-cB 87 60 0.1758 0.1839 0.2667 0.22 3vk0-a2-m1-cB_3vk0-a2-m1-cC
23 2xj3-a1-m1-cB 65 62 0.2308 0.3231 0.3387 0.24 2xj3-a1-m1-cB_2xj3-a1-m1-cA
24 2lyl-a1-m1-cB 66 56 0.2088 0.2879 0.3393 0.26 2lyl-a1-m1-cA_2lyl-a1-m1-cB
25 2lyl-a1-m1-cA 66 56 0.2088 0.2879 0.3393 0.26 2lyl-a1-m1-cA_2lyl-a1-m1-cB
26 7t8i-a1-m1-cB 64 47 0.1538 0.2188 0.2979 0.28 7t8i-a1-m1-cA_7t8i-a1-m1-cB
27 2xj3-a1-m1-cA 66 62 0.2308 0.3182 0.3387 0.28 2xj3-a1-m1-cB_2xj3-a1-m1-cA
28 3f6w-a5-m1-cD 80 35 0.1429 0.1625 0.3714 0.48 3f6w-a5-m1-cC_3f6w-a5-m1-cD
29 3f6w-a5-m1-cC 80 35 0.1429 0.1625 0.3714 0.48 3f6w-a5-m1-cC_3f6w-a5-m1-cD
30 3f6w-a3-m3-cD 80 35 0.1429 0.1625 0.3714 0.48 3f6w-a3-m1-cB_3f6w-a3-m3-cD
31 3f6w-a3-m1-cB 80 35 0.1429 0.1625 0.3714 0.48 3f6w-a3-m1-cB_3f6w-a3-m3-cD
32 4mcx-a1-m1-cC 92 45 0.1319 0.1304 0.2667 0.64 4mcx-a1-m1-cC_4mcx-a1-m1-cA
33 4c5c-a1-m1-cB 306 38 0.1648 0.0490 0.3947 0.69 4c5c-a1-m1-cA_4c5c-a1-m1-cB
34 4c5c-a1-m1-cA 306 38 0.1648 0.0490 0.3947 0.69 4c5c-a1-m1-cA_4c5c-a1-m1-cB
35 4mcx-a1-m1-cA 93 45 0.1319 0.1290 0.2667 0.72 4mcx-a1-m1-cC_4mcx-a1-m1-cA
36 3zkc-a1-m1-cA 61 47 0.1758 0.2623 0.3404 1.6 3zkc-a1-m1-cA_3zkc-a1-m1-cB
37 3zkc-a1-m1-cB 63 47 0.1758 0.2540 0.3404 1.6 3zkc-a1-m1-cA_3zkc-a1-m1-cB
38 4jcy-a1-m1-cB 92 47 0.1868 0.1848 0.3617 1.6 4jcy-a1-m1-cA_4jcy-a1-m1-cB
39 4jcy-a1-m1-cA 92 47 0.1868 0.1848 0.3617 1.6 4jcy-a1-m1-cA_4jcy-a1-m1-cB
40 1b0n-a6-m3-cA 103 47 0.1758 0.1553 0.3404 2.4 1b0n-a6-m1-cA_1b0n-a6-m3-cA
41 1b0n-a6-m1-cA 103 47 0.1758 0.1553 0.3404 2.4 1b0n-a6-m1-cA_1b0n-a6-m3-cA
42 1b0n-a5-m2-cA 103 47 0.1758 0.1553 0.3404 2.4 1b0n-a5-m1-cA_1b0n-a5-m2-cA
43 1b0n-a5-m1-cA 103 47 0.1758 0.1553 0.3404 2.4 1b0n-a5-m1-cA_1b0n-a5-m2-cA
44 4r6i-a1-m1-cB 439 68 0.1978 0.0410 0.2647 3.2 4r6i-a1-m1-cB_4r6i-a1-m1-cA
45 4r6i-a1-m1-cA 463 68 0.1978 0.0389 0.2647 3.9 4r6i-a1-m1-cB_4r6i-a1-m1-cA
46 1vi6-a2-m1-cD 193 50 0.1429 0.0674 0.2600 4.3 1vi6-a2-m1-cD_1vi6-a2-m1-cC
47 1vi6-a2-m1-cC 194 50 0.1429 0.0670 0.2600 4.3 1vi6-a2-m1-cD_1vi6-a2-m1-cC
48 2ef8-a1-m1-cA 83 40 0.1429 0.1566 0.3250 4.9 2ef8-a1-m1-cB_2ef8-a1-m1-cA
49 2ef8-a1-m1-cB 82 40 0.1429 0.1585 0.3250 5.0 2ef8-a1-m1-cB_2ef8-a1-m1-cA
50 4ghj-a1-m1-cA 71 45 0.1429 0.1831 0.2889 5.8 4ghj-a1-m1-cA_4ghj-a1-m1-cB
51 4kik-a1-m1-cA 618 51 0.1978 0.0291 0.3529 7.2 4kik-a1-m1-cA_4kik-a1-m1-cB
52 4ghj-a1-m1-cB 74 45 0.1429 0.1757 0.2889 7.3 4ghj-a1-m1-cA_4ghj-a1-m1-cB
53 4kik-a1-m1-cB 648 51 0.1978 0.0278 0.3529 7.4 4kik-a1-m1-cA_4kik-a1-m1-cB
54 1j98-a1-m2-cA 153 34 0.1429 0.0850 0.3824 7.6 1j98-a1-m1-cA_1j98-a1-m2-cA
55 1j98-a1-m1-cA 153 34 0.1429 0.0850 0.3824 7.6 1j98-a1-m1-cA_1j98-a1-m2-cA
56 4e3c-a3-m1-cE 624 51 0.1978 0.0288 0.3529 7.9 4e3c-a3-m1-cD_4e3c-a3-m1-cE
57 4e3c-a3-m1-cD 624 51 0.1978 0.0288 0.3529 7.9 4e3c-a3-m1-cD_4e3c-a3-m1-cE
58 5n77-a1-m1-cB 257 35 0.1319 0.0467 0.3429 8.1 5n77-a1-m1-cA_5n77-a1-m1-cB
59 5n77-a1-m1-cA 257 35 0.1319 0.0467 0.3429 8.1 5n77-a1-m1-cA_5n77-a1-m1-cB
60 6m6s-a1-m1-cB 162 23 0.0989 0.0556 0.3913 9.5 6m6s-a1-m1-cA_6m6s-a1-m1-cB
61 6m6s-a1-m1-cA 160 23 0.0989 0.0563 0.3913 9.8 6m6s-a1-m1-cA_6m6s-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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