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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
NNALGLVETKGLVGAIEAADAMVASANVQLVGYEKIGSGLVTVMVRGDVGAVKAAVDAGS
AAASVVGEVKSCHVIPRPHSDVEAILPKSA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5d6v-a1-m6-cA 90 90 1.0000 1.0000 1.0000 3.02e-58 5d6v-a1-m2-cA_5d6v-a1-m6-cA
2 5d6v-a1-m2-cA 90 90 1.0000 1.0000 1.0000 3.02e-58 5d6v-a1-m2-cA_5d6v-a1-m6-cA
3 4axj-a1-m2-cC 86 86 0.7556 0.7907 0.7907 2.84e-36 4axj-a1-m2-cC_4axj-a1-m1-cA
4 4axj-a1-m1-cA 87 86 0.7556 0.7816 0.7907 3.19e-36 4axj-a1-m2-cC_4axj-a1-m1-cA
5 7mmx-a2-m1-cD 86 86 0.6889 0.7209 0.7209 2.41e-31 7mmx-a2-m3-cF_7mmx-a2-m1-cD
6 7mmx-a2-m3-cF 85 85 0.6889 0.7294 0.7294 3.67e-31 7mmx-a2-m3-cF_7mmx-a2-m1-cD
7 3dnc-a1-m6-cA 90 87 0.5667 0.5667 0.5862 1.36e-28 3dnc-a1-m2-cA_3dnc-a1-m6-cA
8 3dnc-a1-m2-cA 90 87 0.5667 0.5667 0.5862 1.36e-28 3dnc-a1-m2-cA_3dnc-a1-m6-cA
9 7mgp-a1-m6-cA 93 88 0.6444 0.6237 0.6591 1.56e-28 7mgp-a1-m2-cA_7mgp-a1-m6-cA
10 7mgp-a1-m2-cA 93 88 0.6444 0.6237 0.6591 1.56e-28 7mgp-a1-m2-cA_7mgp-a1-m6-cA
11 3ssq-a1-m2-cC 100 87 0.5667 0.5100 0.5862 5.04e-28 3ssq-a1-m1-cC_3ssq-a1-m2-cC
12 3ssq-a1-m1-cC 100 87 0.5667 0.5100 0.5862 5.04e-28 3ssq-a1-m1-cC_3ssq-a1-m2-cC
13 3mpy-a1-m6-cA 96 86 0.6000 0.5625 0.6279 4.02e-27 3mpy-a1-m2-cA_3mpy-a1-m6-cA
14 3mpy-a1-m2-cA 96 86 0.6000 0.5625 0.6279 4.02e-27 3mpy-a1-m2-cA_3mpy-a1-m6-cA
15 6owg-a1-m1-cDA 100 87 0.5333 0.4800 0.5517 4.26e-27 6owg-a1-m1-cC8_6owg-a1-m1-cDA
16 6owg-a1-m1-cC8 100 87 0.5333 0.4800 0.5517 4.26e-27 6owg-a1-m1-cC8_6owg-a1-m1-cDA
17 6owf-a1-m1-cW 100 87 0.5333 0.4800 0.5517 4.26e-27 6owf-a1-m1-cA6_6owf-a1-m1-cW
18 6owf-a1-m1-cA6 100 87 0.5333 0.4800 0.5517 4.26e-27 6owf-a1-m1-cA6_6owf-a1-m1-cW
19 2ewh-a1-m6-cA 92 88 0.5667 0.5543 0.5795 2.21e-26 2ewh-a1-m2-cA_2ewh-a1-m6-cA
20 2ewh-a1-m2-cA 92 88 0.5667 0.5543 0.5795 2.21e-26 2ewh-a1-m2-cA_2ewh-a1-m6-cA
21 7ckc-a1-m1-cCz 89 87 0.5667 0.5730 0.5862 2.68e-26 7ckc-a1-m1-cBi_7ckc-a1-m1-cCz
22 7ckc-a1-m1-cBi 89 87 0.5667 0.5730 0.5862 2.68e-26 7ckc-a1-m1-cBi_7ckc-a1-m1-cCz
23 4ox6-a1-m3-cA 103 89 0.4333 0.3786 0.4382 4.71e-19 4ox6-a1-m3-cB_4ox6-a1-m3-cA
24 4ox6-a1-m3-cB 93 88 0.4333 0.4194 0.4432 7.06e-19 4ox6-a1-m3-cB_4ox6-a1-m3-cA
25 2a10-a1-m1-cE 102 89 0.4333 0.3824 0.4382 2.32e-17 2a10-a1-m1-cD_2a10-a1-m1-cE
26 2a10-a1-m1-cD 102 89 0.4333 0.3824 0.4382 2.32e-17 2a10-a1-m1-cD_2a10-a1-m1-cE
27 3pac-a1-m3-cA 183 83 0.3333 0.1639 0.3614 3.03e-07 3pac-a1-m2-cA_3pac-a1-m3-cA
28 3pac-a1-m3-cA 183 82 0.3667 0.1803 0.4024 9.01e-05 3pac-a1-m2-cA_3pac-a1-m3-cA
29 3pac-a1-m2-cA 183 83 0.3333 0.1639 0.3614 3.03e-07 3pac-a1-m2-cA_3pac-a1-m3-cA
30 3pac-a1-m2-cA 183 82 0.3667 0.1803 0.4024 9.01e-05 3pac-a1-m2-cA_3pac-a1-m3-cA
31 3nwg-a2-m3-cA 174 82 0.3444 0.1782 0.3780 1.90e-05 3nwg-a2-m2-cA_3nwg-a2-m3-cA
32 3nwg-a2-m3-cA 174 86 0.3444 0.1782 0.3605 0.010 3nwg-a2-m2-cA_3nwg-a2-m3-cA
33 3nwg-a2-m2-cA 174 82 0.3444 0.1782 0.3780 1.90e-05 3nwg-a2-m2-cA_3nwg-a2-m3-cA
34 3nwg-a2-m2-cA 174 86 0.3444 0.1782 0.3605 0.010 3nwg-a2-m2-cA_3nwg-a2-m3-cA
35 3nwg-a1-m6-cA 174 82 0.3444 0.1782 0.3780 1.90e-05 3nwg-a1-m1-cA_3nwg-a1-m6-cA, 3nwg-a1-m3-cA_3nwg-a1-m6-cA
36 3nwg-a1-m6-cA 174 86 0.3444 0.1782 0.3605 0.010 3nwg-a1-m1-cA_3nwg-a1-m6-cA, 3nwg-a1-m3-cA_3nwg-a1-m6-cA
37 3nwg-a1-m3-cA 174 82 0.3444 0.1782 0.3780 1.90e-05 3nwg-a1-m3-cA_3nwg-a1-m6-cA
38 3nwg-a1-m3-cA 174 86 0.3444 0.1782 0.3605 0.010 3nwg-a1-m3-cA_3nwg-a1-m6-cA
39 3nwg-a1-m1-cA 174 82 0.3444 0.1782 0.3780 1.90e-05 3nwg-a1-m1-cA_3nwg-a1-m6-cA
40 3nwg-a1-m1-cA 174 86 0.3444 0.1782 0.3605 0.010 3nwg-a1-m1-cA_3nwg-a1-m6-cA
41 2pgw-a1-m1-cH 363 46 0.1889 0.0468 0.3696 2.4 2pgw-a1-m1-cD_2pgw-a1-m1-cH, 2pgw-a1-m1-cF_2pgw-a1-m1-cH, 2pgw-a1-m1-cH_2pgw-a1-m1-cC
42 2pgw-a1-m1-cF 363 46 0.1889 0.0468 0.3696 2.4 2pgw-a1-m1-cF_2pgw-a1-m1-cH
43 2pgw-a1-m1-cD 363 46 0.1889 0.0468 0.3696 2.4 2pgw-a1-m1-cD_2pgw-a1-m1-cH
44 2pgw-a1-m1-cC 366 46 0.1889 0.0464 0.3696 2.4 2pgw-a1-m1-cH_2pgw-a1-m1-cC
45 3d34-a1-m1-cB 215 69 0.1889 0.0791 0.2464 3.7 3d34-a1-m1-cA_3d34-a1-m1-cB
46 3d34-a1-m1-cA 211 69 0.1889 0.0806 0.2464 3.7 3d34-a1-m1-cA_3d34-a1-m1-cB
47 4mgz-a2-m2-cE 632 65 0.2111 0.0301 0.2923 4.4 4mgz-a2-m1-cE_4mgz-a2-m2-cE
48 4mgz-a2-m1-cE 632 65 0.2111 0.0301 0.2923 4.4 4mgz-a2-m1-cE_4mgz-a2-m2-cE
49 7xto-a1-m1-cB 252 27 0.1444 0.0516 0.4815 5.2 7xto-a1-m1-cE_7xto-a1-m1-cB
50 7xto-a1-m1-cE 247 27 0.1444 0.0526 0.4815 5.2 7xto-a1-m1-cE_7xto-a1-m1-cB
51 3t07-a1-m1-cD 583 40 0.1667 0.0257 0.3750 9.1 3t07-a1-m1-cA_3t07-a1-m1-cD, 3t07-a1-m1-cC_3t07-a1-m1-cD
52 3t07-a1-m1-cC 583 40 0.1667 0.0257 0.3750 9.1 3t07-a1-m1-cC_3t07-a1-m1-cD
53 3t07-a1-m1-cA 583 40 0.1667 0.0257 0.3750 9.1 3t07-a1-m1-cA_3t07-a1-m1-cD

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Reference:
Jacob Schwartz et al.

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