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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
NNELCLRNVFTAQNTAQDFNGNESTVKSFYVTRKKILVAITSTKDNLKTVTCLTETGKTV
LNLDPPMRFSVVYLYFIQNISSLNRGMVIGHISET

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5ym6-a2-m1-cD 95 95 1.0000 1.0000 1.0000 1.52e-66 5ym6-a2-m1-cD_5ym6-a2-m1-cC
2 5ym6-a2-m1-cC 99 99 0.9895 0.9495 0.9495 6.20e-60 5ym6-a2-m1-cD_5ym6-a2-m1-cC
3 5c94-a1-m2-cA 116 105 0.4316 0.3534 0.3905 5.38e-13 5c94-a1-m1-cA_5c94-a1-m2-cA
4 5c94-a1-m1-cA 116 105 0.4316 0.3534 0.3905 5.38e-13 5c94-a1-m1-cA_5c94-a1-m2-cA
5 2j98-a1-m1-cB 102 70 0.2421 0.2255 0.3286 4.45e-09 2j98-a1-m1-cB_2j98-a1-m1-cA
6 2j98-a1-m1-cA 106 70 0.2421 0.2170 0.3286 5.38e-09 2j98-a1-m1-cB_2j98-a1-m1-cA
7 2j97-a1-m2-cA 98 67 0.2421 0.2347 0.3433 1.20e-08 2j97-a1-m1-cA_2j97-a1-m2-cA
8 2j97-a1-m1-cA 98 67 0.2421 0.2347 0.3433 1.20e-08 2j97-a1-m1-cA_2j97-a1-m2-cA
9 8dqu-a1-m6-cF 74 72 0.2842 0.3649 0.3750 1.34e-07 8dqu-a1-m6-cF_8dqu-a1-m6-cC
10 8dqu-a1-m6-cC 78 72 0.2842 0.3462 0.3750 1.53e-07 8dqu-a1-m6-cF_8dqu-a1-m6-cC
11 5hiz-a1-m1-cB 96 67 0.2316 0.2292 0.3284 2.21e-06 5hiz-a1-m1-cA_5hiz-a1-m1-cB
12 5hiz-a1-m1-cA 96 67 0.2316 0.2292 0.3284 2.21e-06 5hiz-a1-m1-cA_5hiz-a1-m1-cB
13 1ydo-a3-m1-cD 291 93 0.3053 0.0997 0.3118 6.3 1ydo-a3-m1-cA_1ydo-a3-m1-cD, 1ydo-a3-m1-cC_1ydo-a3-m1-cD
14 1ydo-a3-m1-cC 291 93 0.3053 0.0997 0.3118 6.3 1ydo-a3-m1-cC_1ydo-a3-m1-cD
15 1ydo-a3-m1-cA 291 93 0.3053 0.0997 0.3118 6.3 1ydo-a3-m1-cA_1ydo-a3-m1-cD
16 4xvv-a1-m1-cB 68 24 0.1053 0.1471 0.4167 6.8 4xvv-a1-m1-cB_4xvv-a1-m1-cA
17 3t07-a1-m1-cD 583 58 0.1789 0.0292 0.2931 7.2 3t07-a1-m1-cA_3t07-a1-m1-cD, 3t07-a1-m1-cC_3t07-a1-m1-cD
18 3t07-a1-m1-cC 583 58 0.1789 0.0292 0.2931 7.2 3t07-a1-m1-cC_3t07-a1-m1-cD
19 3t07-a1-m1-cA 583 58 0.1789 0.0292 0.2931 7.2 3t07-a1-m1-cA_3t07-a1-m1-cD
20 4xvv-a1-m1-cA 72 24 0.1053 0.1389 0.4167 8.1 4xvv-a1-m1-cB_4xvv-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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