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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=86)
NNHQIQELESNVDDLLHQLQLLKEENNRKSMQISEMGKKISDLEVEKTAYRETLTNLNQE
LARLTNEEQSHRTEIFTLNASFKKQL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6vzf-a1-m2-cA 86 86 1.0000 1.0000 1.0000 1.08e-56 6vzf-a1-m1-cA_6vzf-a1-m2-cA
2 6vzf-a1-m1-cA 86 86 1.0000 1.0000 1.0000 1.08e-56 6vzf-a1-m1-cA_6vzf-a1-m2-cA
3 3oy2-a1-m1-cB 392 47 0.1628 0.0357 0.2979 0.39 3oy2-a1-m1-cA_3oy2-a1-m1-cB
4 3oy2-a1-m1-cA 392 47 0.1628 0.0357 0.2979 0.39 3oy2-a1-m1-cA_3oy2-a1-m1-cB
5 7nay-a1-m4-cA 320 64 0.2093 0.0563 0.2812 1.7 7nay-a1-m1-cA_7nay-a1-m4-cA, 7nay-a1-m2-cA_7nay-a1-m4-cA, 7nay-a1-m3-cA_7nay-a1-m4-cA
6 7nay-a1-m3-cA 320 64 0.2093 0.0563 0.2812 1.7 7nay-a1-m3-cA_7nay-a1-m4-cA
7 7nay-a1-m2-cA 320 64 0.2093 0.0563 0.2812 1.7 7nay-a1-m2-cA_7nay-a1-m4-cA
8 7nay-a1-m1-cA 320 64 0.2093 0.0563 0.2812 1.7 7nay-a1-m1-cA_7nay-a1-m4-cA
9 2rgh-a1-m2-cA 534 63 0.2326 0.0375 0.3175 1.7 2rgh-a1-m1-cA_2rgh-a1-m2-cA
10 2rgh-a1-m1-cA 534 63 0.2326 0.0375 0.3175 1.7 2rgh-a1-m1-cA_2rgh-a1-m2-cA
11 8glv-a1-m1-cCp 1075 76 0.2674 0.0214 0.3026 4.6 8glv-a1-m1-cCp_8glv-a1-m1-cCq
12 8glv-a1-m1-cCq 1076 76 0.2674 0.0214 0.3026 4.6 8glv-a1-m1-cCp_8glv-a1-m1-cCq
13 5i08-a1-m1-cC 958 55 0.1512 0.0136 0.2364 5.0 5i08-a1-m1-cB_5i08-a1-m1-cC
14 5i08-a1-m1-cB 958 55 0.1512 0.0136 0.2364 5.0 5i08-a1-m1-cB_5i08-a1-m1-cC
15 4iuo-a1-m1-cB 260 20 0.1279 0.0423 0.5500 5.0 4iuo-a1-m1-cA_4iuo-a1-m1-cB
16 4iuo-a1-m1-cA 259 20 0.1279 0.0425 0.5500 5.3 4iuo-a1-m1-cA_4iuo-a1-m1-cB
17 2p9j-a1-m1-cC 159 44 0.1279 0.0692 0.2500 6.6 2p9j-a1-m1-cD_2p9j-a1-m1-cC, 2p9j-a1-m1-cH_2p9j-a1-m1-cC
18 2p9j-a1-m1-cA 155 44 0.1279 0.0710 0.2500 7.0 2p9j-a1-m1-cE_2p9j-a1-m1-cA
19 2p9j-a1-m1-cD 158 44 0.1279 0.0696 0.2500 7.1 2p9j-a1-m1-cD_2p9j-a1-m1-cC
20 2p9j-a1-m1-cE 150 44 0.1279 0.0733 0.2500 7.5 2p9j-a1-m1-cE_2p9j-a1-m1-cA, 2p9j-a1-m1-cE_2p9j-a1-m1-cH
21 2p9j-a1-m1-cH 153 44 0.1279 0.0719 0.2500 8.0 2p9j-a1-m1-cE_2p9j-a1-m1-cH, 2p9j-a1-m1-cH_2p9j-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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