Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=62)
NPAAEKMQVLQVLDRLRGKLQEKGDTTQNEKLSAFYETLKSPLFNQILTLQQSIKQLKGQ
LS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1y76-a1-m1-cC 62 62 1.0000 1.0000 1.0000 3.93e-39 1y76-a1-m1-cA_1y76-a1-m1-cC
2 1y76-a1-m1-cA 62 62 1.0000 1.0000 1.0000 3.93e-39 1y76-a1-m1-cA_1y76-a1-m1-cC
3 1vf6-a4-m1-cB 60 56 0.8065 0.8333 0.8929 1.08e-29 1vf6-a4-m1-cA_1vf6-a4-m1-cB
4 1vf6-a3-m2-cB 60 56 0.8065 0.8333 0.8929 1.08e-29 1vf6-a3-m1-cA_1vf6-a3-m2-cB, 1vf6-a3-m1-cB_1vf6-a3-m2-cB
5 1vf6-a3-m1-cB 60 56 0.8065 0.8333 0.8929 1.08e-29 1vf6-a3-m1-cB_1vf6-a3-m2-cB, 1vf6-a3-m2-cA_1vf6-a3-m1-cB
6 1vf6-a4-m1-cA 58 54 0.7903 0.8448 0.9074 9.10e-29 1vf6-a4-m1-cA_1vf6-a4-m1-cB
7 1vf6-a3-m2-cA 58 54 0.7903 0.8448 0.9074 9.10e-29 1vf6-a3-m1-cA_1vf6-a3-m2-cA, 1vf6-a3-m2-cA_1vf6-a3-m1-cB
8 1vf6-a3-m1-cA 58 54 0.7903 0.8448 0.9074 9.10e-29 1vf6-a3-m1-cA_1vf6-a3-m2-cA, 1vf6-a3-m1-cA_1vf6-a3-m2-cB
9 2wyu-a1-m1-cA 256 39 0.2258 0.0547 0.3590 5.1 2wyu-a1-m1-cB_2wyu-a1-m1-cA, 2wyu-a1-m1-cD_2wyu-a1-m1-cA
10 1ulu-a1-m1-cC 238 39 0.2258 0.0588 0.3590 5.3 1ulu-a1-m1-cC_1ulu-a1-m1-cA
11 1ulu-a1-m1-cA 240 39 0.2258 0.0583 0.3590 5.3 1ulu-a1-m1-cC_1ulu-a1-m1-cA
12 2wyu-a1-m1-cD 245 39 0.2258 0.0571 0.3590 5.9 2wyu-a1-m1-cD_2wyu-a1-m1-cA
13 2wyu-a1-m1-cB 250 39 0.2258 0.0560 0.3590 6.4 2wyu-a1-m1-cB_2wyu-a1-m1-cA
14 5wx6-a2-m1-cC 368 24 0.1774 0.0299 0.4583 7.1 5wx6-a2-m1-cC_5wx6-a2-m1-cB
15 5wx6-a2-m1-cB 376 24 0.1774 0.0293 0.4583 7.2 5wx6-a2-m1-cC_5wx6-a2-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600