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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
NPKRSSDYYNRSTSPWNLHRNEDRYPSVIWEAKCRHLGCINADGNVDYHMNSVPIQQEIL
VLRLEKILVSVGCTCVTPIV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2vxs-a2-m1-cB 80 80 1.0000 1.0000 1.0000 2.65e-56 2vxs-a2-m1-cB_2vxs-a2-m1-cA
2 2vxs-a2-m1-cA 86 84 1.0000 0.9302 0.9524 2.19e-52 2vxs-a2-m1-cB_2vxs-a2-m1-cA
3 6wir-a1-m2-cC 89 88 0.9375 0.8427 0.8523 1.38e-46 6wir-a1-m1-cC_6wir-a1-m2-cC
4 6wir-a1-m1-cC 89 88 0.9375 0.8427 0.8523 1.38e-46 6wir-a1-m1-cC_6wir-a1-m2-cC
5 5vb9-a1-m2-cA 108 89 0.9250 0.6852 0.8315 2.88e-46 5vb9-a1-m1-cA_5vb9-a1-m2-cA
6 5vb9-a1-m1-cA 108 89 0.9250 0.6852 0.8315 2.88e-46 5vb9-a1-m1-cA_5vb9-a1-m2-cA
7 1jpy-a1-m1-cB 121 88 0.6000 0.3967 0.5455 2.71e-25 1jpy-a1-m1-cA_1jpy-a1-m1-cB
8 1jpy-a1-m1-cA 121 88 0.6000 0.3967 0.5455 2.71e-25 1jpy-a1-m1-cA_1jpy-a1-m1-cB
9 1ygp-a1-m1-cB 858 26 0.1125 0.0105 0.3462 2.2 1ygp-a1-m1-cB_1ygp-a1-m1-cA
10 1ygp-a1-m1-cA 858 26 0.1125 0.0105 0.3462 2.2 1ygp-a1-m1-cB_1ygp-a1-m1-cA
11 3k8e-a2-m1-cA 242 31 0.1375 0.0455 0.3548 2.6 3k8e-a2-m1-cA_3k8e-a2-m1-cB
12 3udx-a1-m1-cB 595 30 0.1750 0.0235 0.4667 3.7 3udx-a1-m1-cB_3udx-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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