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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=79)
NPLDKWNDIIFHASKKLSKKELERLLELLALLETFIEKEDLEEKFESFAKALRIDEELQQ
KIESRKTDIVIQSANILSG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4u12-a1-m2-cA 79 79 1.0000 1.0000 1.0000 5.56e-50 4u12-a1-m1-cA_4u12-a1-m2-cA
2 4u12-a1-m1-cA 79 79 1.0000 1.0000 1.0000 5.56e-50 4u12-a1-m1-cA_4u12-a1-m2-cA
3 3mli-a3-m2-cA 91 80 0.9873 0.8571 0.9750 1.48e-47 3mli-a3-m2-cA_3mli-a3-m1-cD
4 3mli-a3-m1-cD 94 80 0.9873 0.8298 0.9750 1.71e-47 3mli-a3-m2-cA_3mli-a3-m1-cD
5 3mlg-a3-m2-cB 161 80 1.0000 0.4907 0.9875 4.49e-47 3mlg-a3-m1-cA_3mlg-a3-m2-cB
6 3mlg-a3-m2-cB 161 80 1.0000 0.4907 0.9875 4.49e-47 3mlg-a3-m1-cA_3mlg-a3-m2-cB
7 3mlg-a3-m1-cA 161 80 1.0000 0.4907 0.9875 4.49e-47 3mlg-a3-m1-cA_3mlg-a3-m2-cB
8 3mlg-a3-m1-cA 161 80 1.0000 0.4907 0.9875 4.49e-47 3mlg-a3-m1-cA_3mlg-a3-m2-cB
9 3icc-a1-m2-cB 248 26 0.1519 0.0484 0.4615 3.2 3icc-a1-m1-cA_3icc-a1-m2-cB, 3icc-a1-m2-cA_3icc-a1-m2-cB
10 3icc-a1-m2-cA 248 26 0.1519 0.0484 0.4615 3.2 3icc-a1-m2-cA_3icc-a1-m2-cB
11 3icc-a1-m1-cA 248 26 0.1519 0.0484 0.4615 3.2 3icc-a1-m1-cA_3icc-a1-m2-cB
12 3gnt-a2-m1-cB 200 72 0.2658 0.1050 0.2917 5.4 3gnt-a2-m1-cB_3gnt-a2-m1-cA
13 3gnt-a1-m1-cB 200 72 0.2658 0.1050 0.2917 5.4 3gnt-a1-m1-cB_3gnt-a1-m2-cA
14 4yh2-a1-m1-cC 220 32 0.1013 0.0364 0.2500 6.1 4yh2-a1-m1-cC_4yh2-a1-m1-cA
15 4yh2-a1-m1-cA 221 32 0.1013 0.0362 0.2500 6.1 4yh2-a1-m1-cC_4yh2-a1-m1-cA
16 3gnt-a2-m1-cA 207 73 0.2911 0.1111 0.3151 7.1 3gnt-a2-m1-cB_3gnt-a2-m1-cA
17 3gnt-a1-m2-cA 207 73 0.2911 0.1111 0.3151 7.1 3gnt-a1-m1-cB_3gnt-a1-m2-cA
18 1jnr-a1-m1-cC 642 42 0.2025 0.0249 0.3810 7.2 1jnr-a1-m1-cA_1jnr-a1-m1-cC
19 1jnr-a1-m1-cA 642 42 0.2025 0.0249 0.3810 7.2 1jnr-a1-m1-cA_1jnr-a1-m1-cC
20 4aln-a3-m1-cK 218 70 0.2532 0.0917 0.2857 7.9 4aln-a3-m1-cJ_4aln-a3-m1-cK
21 4aln-a3-m1-cI 214 70 0.2532 0.0935 0.2857 8.1 4aln-a3-m1-cL_4aln-a3-m1-cI
22 7uro-a1-m1-cC 1160 31 0.1392 0.0095 0.3548 9.7 7uro-a1-m1-cA_7uro-a1-m1-cC
23 7uro-a1-m1-cA 1160 31 0.1392 0.0095 0.3548 9.7 7uro-a1-m1-cA_7uro-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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