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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
NPWWAAFSRVCKDMNLTLEPEIMPAAGDNRYIRAVGVPALGFSPMNRTPVLLHDHDERLH
EAVFLRGVDIYTRLLPALASVPALPSDS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1q7l-a3-m1-cB 88 88 1.0000 1.0000 1.0000 2.03e-61 1q7l-a3-m1-cD_1q7l-a3-m1-cB
2 1q7l-a3-m1-cD 85 85 0.9659 1.0000 1.0000 3.30e-59 1q7l-a3-m1-cD_1q7l-a3-m1-cB
3 4pr3-a1-m1-cB 192 34 0.1705 0.0781 0.4412 1.3 4pr3-a1-m1-cB_4pr3-a1-m1-cA
4 6ut7-a1-m1-cN 414 41 0.1477 0.0314 0.3171 4.3 6ut7-a1-m1-cG_6ut7-a1-m1-cN
5 6ut7-a1-m1-cG 414 41 0.1477 0.0314 0.3171 4.3 6ut7-a1-m1-cG_6ut7-a1-m1-cN

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Reference:
Jacob Schwartz et al.

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