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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=48)
NQGRIWTVVNPGVGLPLLLGSVTVIAILVHYAVLSNTTWFPKYWNGAT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7zdi-a1-m1-cQ 48 48 1.0000 1.0000 1.0000 7.38e-29 7zdi-a1-m1-cO_7zdi-a1-m1-cQ
2 7zdi-a1-m1-cO 48 48 1.0000 1.0000 1.0000 7.38e-29 7zdi-a1-m1-cO_7zdi-a1-m1-cQ
3 7ze3-a1-m1-cQ 47 46 0.6667 0.6809 0.6957 2.93e-18 7ze3-a1-m1-cO_7ze3-a1-m1-cQ
4 7ze3-a1-m1-cO 47 46 0.6667 0.6809 0.6957 2.93e-18 7ze3-a1-m1-cO_7ze3-a1-m1-cQ
5 7pbw-a1-m1-cAI 49 47 0.4375 0.4286 0.4468 1.12e-11 7pbw-a1-m1-cAH_7pbw-a1-m1-cAI
6 7pbw-a1-m1-cAH 49 47 0.4375 0.4286 0.4468 1.12e-11 7pbw-a1-m1-cAH_7pbw-a1-m1-cAI
7 7vrj-a1-m1-cK 43 33 0.2292 0.2558 0.3333 0.076 7vrj-a1-m1-cI_7vrj-a1-m1-cK
8 7vrj-a1-m1-cI 43 33 0.2292 0.2558 0.3333 0.076 7vrj-a1-m1-cI_7vrj-a1-m1-cK
9 6q53-a1-m1-cA 54 41 0.2917 0.2593 0.3415 0.25 6q53-a1-m1-cA_6q53-a1-m1-cD
10 6q53-a1-m1-cD 57 41 0.2917 0.2456 0.3415 0.25 6q53-a1-m1-cA_6q53-a1-m1-cD
11 8apr-a2-m2-cC 404 22 0.2083 0.0248 0.4545 2.9 8apr-a2-m1-cC_8apr-a2-m2-cC
12 8apr-a2-m1-cC 404 22 0.2083 0.0248 0.4545 2.9 8apr-a2-m1-cC_8apr-a2-m2-cC
13 6zxa-a1-m1-cM 69 35 0.2500 0.1739 0.3429 4.2 6zxa-a1-m1-cK_6zxa-a1-m1-cM
14 6zxa-a1-m1-cK 69 35 0.2500 0.1739 0.3429 4.2 6zxa-a1-m1-cK_6zxa-a1-m1-cM
15 7vrj-a1-m1-cW 55 36 0.1875 0.1636 0.2500 4.9 7vrj-a1-m1-cW_7vrj-a1-m1-cY
16 7vrj-a1-m1-cY 62 36 0.1875 0.1452 0.2500 6.9 7vrj-a1-m1-cW_7vrj-a1-m1-cY
17 5v56-a1-m1-cB 634 20 0.1458 0.0110 0.3500 9.2 5v56-a1-m1-cA_5v56-a1-m1-cB
18 4qin-a1-m2-cA 447 20 0.1458 0.0157 0.3500 9.7 4qin-a1-m1-cA_4qin-a1-m2-cA
19 4qin-a1-m1-cA 447 20 0.1458 0.0157 0.3500 9.7 4qin-a1-m1-cA_4qin-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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