Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=64)
NQKLTKKALIKEYTEEIERLKRDLAALEKERDFYFGKLRNIELICQENEGENDPVLQRIV
DILY

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 5jv3-a2-m1-cD 68 64 1.0000 0.9412 1.0000 7.17e-41 5jv3-a2-m1-cC_5jv3-a2-m1-cD
2 5jv3-a2-m1-cC 64 64 1.0000 1.0000 1.0000 1.45e-40 5jv3-a2-m1-cC_5jv3-a2-m1-cD
3 5jvm-a1-m1-cA 82 67 0.7500 0.5854 0.7164 1.02e-25 5jvm-a1-m1-cB_5jvm-a1-m1-cA
4 5jvm-a1-m1-cB 79 66 0.7500 0.6076 0.7273 1.04e-25 5jvm-a1-m1-cB_5jvm-a1-m1-cA
5 5jvu-a1-m1-cB 69 67 0.7344 0.6812 0.7015 8.87e-25 5jvu-a1-m1-cB_5jvu-a1-m1-cA
6 5jvp-a2-m3-cB 88 76 0.7344 0.5341 0.6184 6.50e-24 5jvp-a2-m1-cB_5jvp-a2-m3-cB
7 5jvp-a2-m1-cB 88 76 0.7344 0.5341 0.6184 6.50e-24 5jvp-a2-m1-cB_5jvp-a2-m3-cB
8 5jvu-a1-m1-cA 76 66 0.7188 0.6053 0.6970 8.88e-24 5jvu-a1-m1-cB_5jvu-a1-m1-cA
9 4xa1-a1-m1-cB 155 63 0.6719 0.2774 0.6825 3.43e-23 4xa1-a1-m1-cA_4xa1-a1-m1-cB
10 4xa1-a1-m1-cA 153 63 0.6719 0.2810 0.6825 3.68e-23 4xa1-a1-m1-cA_4xa1-a1-m1-cB
11 6pfp-a2-m1-cD 156 53 0.6562 0.2692 0.7925 3.92e-23 6pfp-a2-m1-cC_6pfp-a2-m1-cD
12 6pfp-a2-m1-cC 156 53 0.6562 0.2692 0.7925 3.92e-23 6pfp-a2-m1-cC_6pfp-a2-m1-cD
13 6pf2-a1-m1-cB 150 55 0.6719 0.2867 0.7818 4.44e-23 6pf2-a1-m1-cB_6pf2-a1-m1-cA
14 6pf2-a1-m1-cA 157 55 0.6719 0.2739 0.7818 5.69e-23 6pf2-a1-m1-cB_6pf2-a1-m1-cA
15 3mtu-a2-m1-cB 65 37 0.5312 0.5231 0.9189 1.83e-20 3mtu-a2-m1-cB_3mtu-a2-m1-cA, 3mtu-a2-m1-cD_3mtu-a2-m1-cB
16 3mtu-a2-m1-cD 64 37 0.5312 0.5312 0.9189 2.16e-20 3mtu-a2-m1-cD_3mtu-a2-m1-cB
17 3mtu-a2-m1-cA 72 37 0.5312 0.4722 0.9189 3.29e-20 3mtu-a2-m1-cB_3mtu-a2-m1-cA
18 6yf5-a2-m1-cD 82 33 0.5156 0.4024 1.0000 4.46e-19 6yf5-a2-m1-cD_6yf5-a2-m1-cC
19 6yf5-a2-m1-cC 87 33 0.5156 0.3793 1.0000 4.71e-19 6yf5-a2-m1-cD_6yf5-a2-m1-cC
20 4xa6-a2-m1-cC 100 36 0.5312 0.3400 0.9444 4.82e-18 4xa6-a2-m1-cD_4xa6-a2-m1-cC
21 4xa6-a2-m1-cD 93 36 0.5312 0.3656 0.9444 4.91e-18 4xa6-a2-m1-cD_4xa6-a2-m1-cC
22 4xa6-a1-m1-cA 149 36 0.5312 0.2282 0.9444 1.09e-17 4xa6-a1-m1-cB_4xa6-a1-m1-cA
23 4xa6-a1-m1-cB 146 36 0.5156 0.2260 0.9167 2.37e-15 4xa6-a1-m1-cB_4xa6-a1-m1-cA
24 4xa3-a1-m1-cA 142 62 0.5469 0.2465 0.5645 9.99e-15 4xa3-a1-m1-cA_4xa3-a1-m1-cB
25 4xa3-a1-m1-cB 142 61 0.5312 0.2394 0.5574 9.30e-14 4xa3-a1-m1-cA_4xa3-a1-m1-cB
26 5jx1-a1-m2-cA 64 60 0.6406 0.6406 0.6833 7.60e-13 5jx1-a1-m1-cA_5jx1-a1-m2-cA
27 5jx1-a1-m1-cA 64 60 0.6406 0.6406 0.6833 7.60e-13 5jx1-a1-m1-cA_5jx1-a1-m2-cA
28 4e61-a1-m1-cA 91 64 0.4219 0.2967 0.4219 4.07e-06 4e61-a1-m1-cB_4e61-a1-m1-cA
29 4e61-a1-m1-cB 84 62 0.3906 0.2976 0.4032 1.09e-05 4e61-a1-m1-cB_4e61-a1-m1-cA
30 5m9e-a2-m1-cC 68 45 0.3125 0.2941 0.4444 2.36e-05 5m9e-a2-m1-cC_5m9e-a2-m1-cD
31 5m9e-a2-m1-cD 70 45 0.3125 0.2857 0.4444 2.54e-05 5m9e-a2-m1-cC_5m9e-a2-m1-cD
32 5omb-a1-m1-cD 98 35 0.2188 0.1429 0.4000 2.3 5omb-a1-m1-cC_5omb-a1-m1-cD
33 5omb-a1-m1-cC 98 35 0.2188 0.1429 0.4000 2.3 5omb-a1-m1-cC_5omb-a1-m1-cD
34 4ina-a1-m1-cB 383 38 0.2344 0.0392 0.3947 3.1 4ina-a1-m1-cA_4ina-a1-m1-cB
35 4ina-a1-m1-cA 380 38 0.2344 0.0395 0.3947 3.1 4ina-a1-m1-cA_4ina-a1-m1-cB
36 6n2g-a1-m2-cD 273 32 0.1406 0.0330 0.2812 3.9 6n2g-a1-m2-cD_6n2g-a1-m1-cA
37 6n2g-a1-m1-cA 285 32 0.1406 0.0316 0.2812 3.9 6n2g-a1-m2-cD_6n2g-a1-m1-cA
38 3itb-a3-m1-cC 347 39 0.2188 0.0403 0.3590 8.8 3itb-a3-m1-cL_3itb-a3-m1-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600