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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
NQSLHQEGFSIPLLWLQNCLIRAADDREESQAVPLVPLTEENEEAENEQFQQLLRKLGVR
PPASGQETFWRIPAKLSPTQLRRAAASL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4xhw-a3-m1-cA 88 88 1.0000 1.0000 1.0000 1.29e-59 4xhw-a3-m1-cA_4xhw-a3-m1-cD
2 4xhw-a3-m1-cD 90 90 1.0000 0.9778 0.9778 1.64e-57 4xhw-a3-m1-cA_4xhw-a3-m1-cD, 4xhw-a3-m1-cD_4xhw-a3-m1-cB
3 4xhw-a3-m1-cB 91 91 1.0000 0.9670 0.9670 3.20e-57 4xhw-a3-m1-cD_4xhw-a3-m1-cB
4 4xht-a1-m1-cB 92 89 0.9886 0.9457 0.9775 6.67e-57 4xht-a1-m1-cB_4xht-a1-m1-cA
5 4xht-a1-m1-cA 94 92 0.9886 0.9255 0.9457 1.47e-54 4xht-a1-m1-cB_4xht-a1-m1-cA
6 5xgb-a1-m2-cA 551 70 0.2500 0.0399 0.3143 0.86 5xgb-a1-m1-cA_5xgb-a1-m2-cA
7 5xgb-a1-m1-cA 551 70 0.2500 0.0399 0.3143 0.86 5xgb-a1-m1-cA_5xgb-a1-m2-cA
8 6pqu-a1-m1-cE 468 34 0.1477 0.0278 0.3824 2.1 6pqu-a1-m1-cA_6pqu-a1-m1-cE
9 6pqu-a1-m1-cA 468 34 0.1477 0.0278 0.3824 2.1 6pqu-a1-m1-cA_6pqu-a1-m1-cE
10 6pqn-a1-m1-cB 451 34 0.1477 0.0288 0.3824 2.1 6pqn-a1-m1-cB_6pqn-a1-m1-cA
11 6pr5-a1-m1-cE 480 34 0.1477 0.0271 0.3824 2.2 6pr5-a1-m1-cA_6pr5-a1-m1-cE
12 6pr5-a1-m1-cA 480 34 0.1477 0.0271 0.3824 2.2 6pr5-a1-m1-cA_6pr5-a1-m1-cE
13 6pqn-a1-m1-cA 457 34 0.1477 0.0284 0.3824 2.3 6pqn-a1-m1-cB_6pqn-a1-m1-cA
14 6pqy-a1-m1-cD 460 34 0.1477 0.0283 0.3824 2.3 6pqy-a1-m1-cA_6pqy-a1-m1-cD
15 6pqy-a1-m1-cA 460 34 0.1477 0.0283 0.3824 2.3 6pqy-a1-m1-cA_6pqy-a1-m1-cD
16 3otg-a2-m2-cA 388 44 0.1818 0.0412 0.3636 5.1 3otg-a2-m1-cA_3otg-a2-m2-cA
17 3otg-a2-m1-cA 388 44 0.1818 0.0412 0.3636 5.1 3otg-a2-m1-cA_3otg-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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