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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=50)
NQTLKDEYDALQITFTALEEKLRKTTEENQELVTRWMAEKAQEANRLNAE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6sur-a3-m1-cM 50 50 1.0000 1.0000 1.0000 1.23e-29 6sur-a3-m1-cN_6sur-a3-m1-cM
2 6zay-a1-m1-cD 86 50 1.0000 0.5814 1.0000 1.64e-29 6zay-a1-m1-cC_6zay-a1-m1-cD
3 6zay-a1-m1-cC 86 50 1.0000 0.5814 1.0000 1.64e-29 6zay-a1-m1-cC_6zay-a1-m1-cD
4 6sur-a3-m1-cN 49 49 0.9800 1.0000 1.0000 7.53e-29 6sur-a3-m1-cN_6sur-a3-m1-cM
5 7xfr-a1-m1-cB 69 30 0.5800 0.4203 0.9667 5.07e-14 7xfr-a1-m2-cD_7xfr-a1-m1-cB
6 7xfr-a1-m2-cD 62 29 0.5600 0.4516 0.9655 3.80e-13 7xfr-a1-m2-cD_7xfr-a1-m1-cB
7 5cjp-a1-m1-cF 372 30 0.2200 0.0296 0.3667 6.7 5cjp-a1-m1-cE_5cjp-a1-m1-cF
8 5cjp-a1-m1-cE 372 30 0.2200 0.0296 0.3667 6.7 5cjp-a1-m1-cE_5cjp-a1-m1-cF

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Reference:
Jacob Schwartz et al.

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